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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183732876
PJTX01029214
237201
Alphaproteobacteria
CAT
Met
>WENV183732670
PJTX01005552
96238
Alphaproteobacteria
GAG
Leu
>WENV183732832
PJTX01019705
23385
Alphaproteobacteria
CGA
Ser
>WENV183732780
PJTX01013501
251191
Alphaproteobacteria
TAC
Val
>WENV183732802
PJTX01016110
59361
Alphaproteobacteria
GAG
Leu
>WENV183732799
PJTX01015540
58865
Alphaproteobacteria
GAG
Leu
>WENV183732761
PJTX01011212
241021
Alphaproteobacteria
GGC
Ala
>WENV183732650
PJTX01004851
241021
Alphaproteobacteria
GGC
Ala
>WENV183732488
PJTX01000988
147152
Alphaproteobacteria
ACG
Arg
>WENV183732487
PJTX01000988
147152
Alphaproteobacteria
ACG
Arg
>WENV183732767
PJTX01011876
81064
Alphaproteobacteria
GTA
Tyr
>WENV183732596
PJTX01003023
146683
Alphaproteobacteria
GTG
His
>WENV183732776
PJTX01012837
338286
Alphaproteobacteria
TTG
Gln
>WENV183732815
PJTX01017638
23685
Alphaproteobacteria
CGA
Ser
>WENV183732649
PJTX01004851
239035
Alphaproteobacteria
CGC
Ala
>WENV183732663
PJTX01005107
236134
Alphaproteobacteria
TAC
Val
>WENV183732846
PJTX01023234
126658
Alphaproteobacteria
GGG
Pro
>WENV183732825
PJTX01018344
345376
Alphaproteobacteria
GAC
Val
>WENV183732580
PJTX01002717
243803
Alphaproteobacteria
CAT
Met
>WENV183732752
PJTX01010378
339495
Alphaproteobacteria
>WENV183732520
PJTX01001441
24459
Alphaproteobacteria
CGA
Ser
>WENV183732749
PJTX01010160
97145
Alphaproteobacteria
TAG
Leu
>WENV183732829
PJTX01019547
151730
Alphaproteobacteria
CCG
Arg
>WENV183732740
PJTX01009878
239037
Alphaproteobacteria
TTT
Lys
>WENV183732437
PJTX01000259
237281
Alphaproteobacteria
CGT
Thr
>WENV183732731
PJTX01008997
411642
Alphaproteobacteria
GCA
Cys
>WENV183732703
PJTX01007034
80837
Alphaproteobacteria
TAA
Leu
>WENV183732571
PJTX01002611
338622
Alphaproteobacteria
GTT
Asn
>WENV183732800
PJTX01015677
237196
Alphaproteobacteria
CGT
Thr
>WENV183732632
PJTX01004187
96322
Alphaproteobacteria
CAA
Leu
>WENV183732522
PJTX01001453
237579
Alphaproteobacteria
CTT
Lys
>WENV183732788
PJTX01014762
411617
Alphaproteobacteria
GCA
Cys
>WENV183732654
PJTX01004990
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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