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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183735819
PJUB01003887
146962
Bacteroidota
CAT
Met
>WENV183735870
PJUB01006825
159146
Bacteroidota
TCG
Arg
>WENV183735698
PJUB01000655
412419
Bacteroidota
CCA
Trp
>WENV183735542
PJUB01000039
147867
Bacteroidota
GTG
His
>WENV183735673
PJUB01000439
147867
Bacteroidota
GTG
His
>WENV183735767
PJUB01001850
147867
Bacteroidota
GTG
His
>WENV183735686
PJUB01000549
147864
Bacteroidota
TGG
Pro
>WENV183735687
PJUB01000549
147864
Bacteroidota
TGG
Pro
>WENV183735688
PJUB01000549
147864
Bacteroidota
TGG
Pro
>WENV183735721
PJUB01000885
147864
Bacteroidota
TGG
Pro
>WENV183735722
PJUB01000885
147864
Bacteroidota
TGG
Pro
>WENV183735942
PJUB01016386
147864
Bacteroidota
TGG
Pro
>WENV183735544
PJUB01000039
45276
Bacteroidota
TGA
Ser
>WENV183735650
PJUB01000316
45276
Bacteroidota
TGA
Ser
>WENV183735733
PJUB01001009
45276
Bacteroidota
TGA
Ser
>WENV183735756
PJUB01001421
45276
Bacteroidota
TGA
Ser
>WENV183735795
PJUB01002782
45276
Bacteroidota
TGA
Ser
>WENV183735796
PJUB01002782
45276
Bacteroidota
TGA
Ser
>WENV183736006
PJUB01030217
119517
Bacteroidota
CAA
Leu
>WENV183735854
PJUB01005550
119517
Bacteroidota
CAA
Leu
>WENV183735741
PJUB01001077
119517
Bacteroidota
CAA
Leu
>WENV183735702
PJUB01000696
119517
Bacteroidota
CAA
Leu
>WENV183735773
PJUB01002039
148243
Bacteroidota
GGC
Ala
>WENV183735799
PJUB01002841
51937
Bacteroidota
TAA
Leu
>WENV183735777
PJUB01002121
51937
Bacteroidota
TAA
Leu
>WENV183735752
PJUB01001276
51937
Bacteroidota
TAA
Leu
>WENV183735633
PJUB01000268
51937
Bacteroidota
TAA
Leu
>WENV183735907
PJUB01010392
235817
Bacteroidota
GAA
Phe
>WENV183735770
PJUB01002017
235817
Bacteroidota
GAA
Phe
>WENV183735839
PJUB01004510
237606
Bacteroidota
GCC
Gly
>WENV183735709
PJUB01000733
59351
Bacteroidota
GAG
Leu
>WENV183735613
PJUB01000197
59351
Bacteroidota
GAG
Leu
>WENV183735821
PJUB01003909
415980
Bacteroidota
TTG
Gln
>WENV183735820
PJUB01003909
415980
Bacteroidota
TTG
Gln
>WENV183735918
PJUB01011470
113741
Bacteroidota
GTA
Tyr
>WENV183735830
PJUB01004109
113741
Bacteroidota
GTA
Tyr
>WENV183735788
PJUB01002575
113741
Bacteroidota
GTA
Tyr
>WENV183735696
PJUB01000655
267805
Bacteroidota
TCC
Gly
>WENV183735803
PJUB01003209
241469
Bacteroidota
GAA
Phe
>WENV183735887
PJUB01008407
239858
Bacteroidota
TTT
Lys
>WENV183735886
PJUB01008407
239858
Bacteroidota
TTT
Lys
>WENV183735831
PJUB01004116
239858
Bacteroidota
TTT
Lys
>WENV183735853
PJUB01005489
347983
Bacteroidota
TTC
Glu
>WENV183735882
PJUB01007691
159029
Bacteroidota
GTG
His
>WENV183735790
PJUB01002575
412189
Bacteroidota
CCA
Trp
>WENV183735802
PJUB01003194
413186
Bacteroidota
>WENV183735815
PJUB01003704
127215
Bacteroidota
TAC
Val
>WENV183735719
PJUB01000863
127215
Bacteroidota
TAC
Val
>WENV183735653
PJUB01000321
127215
Bacteroidota
TAC
Val
>WENV183735651
PJUB01000321
127215
Bacteroidota
TAC
Val
>WENV183735994
PJUB01026178
238600
Bacteroidota
CAT
Met
>WENV183735993
PJUB01026178
238600
Bacteroidota
CAT
Met
>WENV183735929
PJUB01012716
238600
Bacteroidota
CAT
Met
>WENV183735714
PJUB01000801
238600
Bacteroidota
CAT
Met
>WENV183735603
PJUB01000149
238600
Bacteroidota
CAT
Met
>WENV183735602
PJUB01000149
238600
Bacteroidota
CAT
Met
>WENV183735697
PJUB01000655
342824
Bacteroidota
GGT
Thr
>WENV183735764
PJUB01001827
199370
Bacteroidota
GTT
Asn
>WENV183735652
PJUB01000321
126680
Bacteroidota
TAC
Val
>WENV183735759
PJUB01001460
411719
Bacteroidota
GCA
Cys
>WENV183735685
PJUB01000549
411719
Bacteroidota
GCA
Cys
>WENV183735701
PJUB01000691
160686
Bacteroidota
CAT
Met
>WENV183735823
PJUB01003919
152147
Bacteroidota
TCT
Arg
>WENV183735868
PJUB01006676
235822
Bacteroidota
TGT
Thr
>WENV183735694
PJUB01000655
235822
Bacteroidota
TGT
Thr
>WENV183735455
PJUB01000008
235822
Bacteroidota
TGT
Thr
>WENV183735454
PJUB01000008
235822
Bacteroidota
TGT
Thr
>WENV183735453
PJUB01000008
235822
Bacteroidota
TGT
Thr
>WENV183735728
PJUB01000944
147863
Bacteroidota
CAT
Met
>WENV183735727
PJUB01000944
147863
Bacteroidota
CAT
Met
>WENV183735693
PJUB01000652
147863
Bacteroidota
CAT
Met
>WENV183735692
PJUB01000652
147863
Bacteroidota
CAT
Met
>WENV183735793
PJUB01002708
150454
Bacteroidota
TGT
Thr
>WENV183735792
PJUB01002708
150454
Bacteroidota
TGT
Thr
>WENV183735787
PJUB01002575
150454
Bacteroidota
TGT
Thr
>WENV183735867
PJUB01006676
237427
Bacteroidota
TGT
Thr
>WENV183735789
PJUB01002575
360629
Bacteroidota
GGT
Thr
>WENV183735842
PJUB01004803
96696
Bacteroidota
TAG
Leu
>WENV183735840
PJUB01004510
37199
Bacteroidota
TAA
Leu
>WENV183735888
PJUB01008407
83316
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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