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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183728122
PJTP01038961
149229
Betaproteobacteria
TCT
Arg
>WENV183727962
PJTP01010443
248752
Betaproteobacteria
GCC
Gly
>WENV183727963
PJTP01010443
248752
Betaproteobacteria
GCC
Gly
>WENV183727964
PJTP01010443
248752
Betaproteobacteria
GCC
Gly
>WENV183727918
PJTP01005460
146768
Betaproteobacteria
CAT
Met
>WENV183727919
PJTP01005460
146768
Betaproteobacteria
CAT
Met
>WENV183727800
PJTP01000463
237238
Betaproteobacteria
GTT
Asn
>WENV183728071
PJTP01027570
237238
Betaproteobacteria
GTT
Asn
>WENV183728161
PJTP01051812
237238
Betaproteobacteria
GTT
Asn
>WENV183727851
PJTP01001297
267870
Betaproteobacteria
TTC
Glu
>WENV183727842
PJTP01001137
237682
Betaproteobacteria
CGT
Thr
>WENV183728101
PJTP01033971
59425
Betaproteobacteria
TAG
Leu
>WENV183727952
PJTP01009417
59425
Betaproteobacteria
TAG
Leu
>WENV183728133
PJTP01041606
340345
Betaproteobacteria
CCT
Arg
>WENV183728117
PJTP01037981
339995
Betaproteobacteria
CAC
Val
>WENV183727994
PJTP01013025
145695
Betaproteobacteria
GGG
Pro
>WENV183727802
PJTP01000483
145695
Betaproteobacteria
GGG
Pro
>WENV183727801
PJTP01000463
258352
Betaproteobacteria
TGT
Thr
>WENV183727903
PJTP01004721
238346
Betaproteobacteria
CGT
Thr
>WENV183727870
PJTP01002080
17915
Betaproteobacteria
GGA
Ser
>WENV183728120
PJTP01038834
238587
Betaproteobacteria
TAC
Val
>WENV183727998
PJTP01014040
238349
Betaproteobacteria
CTT
Lys
>WENV183727844
PJTP01001145
238349
Betaproteobacteria
CTT
Lys
>WENV183727904
PJTP01004905
147017
Betaproteobacteria
GAT
Ile
>WENV183727899
PJTP01004140
17930
Betaproteobacteria
GGA
Ser
>WENV183727790
PJTP01000355
162621
Betaproteobacteria
TTG
Gln
>WENV183727949
PJTP01008857
415147
Betaproteobacteria
CCC
Gly
>WENV183728019
PJTP01017393
352197
Betaproteobacteria
GGT
Thr
>WENV183727789
PJTP01000349
147855
Betaproteobacteria
TTG
Gln
>WENV183727814
PJTP01000663
151824
Betaproteobacteria
TCT
Arg
>WENV183728168
PJTP01053540
144934
Betaproteobacteria
TTG
Gln
>WENV183727869
PJTP01001976
6969
Betaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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