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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170744405
LULX01000959
779604
Gammaproteobacteria
GCA
Cys
>WENV170745087
LULX01037321
779604
Gammaproteobacteria
GCA
Cys
>WENV170744240
LULX01000017
275465
Gammaproteobacteria
GAC
Val
>WENV170744416
LULX01001043
275465
Gammaproteobacteria
GAC
Val
>WENV170744315
LULX01000229
454974
Gammaproteobacteria
TAC
Val
>WENV170744256
LULX01000044
273863
Gammaproteobacteria
GGG
Pro
>WENV170744259
LULX01000055
454971
Gammaproteobacteria
TTT
Lys
>WENV170744296
LULX01000150
271464
Gammaproteobacteria
TGG
Pro
>WENV170744298
LULX01000150
452415
Gammaproteobacteria
GTG
His
>WENV170744580
LULX01003723
656944
Gammaproteobacteria
CCT
Arg
>WENV170744253
LULX01000043
780242
Gammaproteobacteria
GCA
Cys
>WENV170744830
LULX01014065
320299
Gammaproteobacteria
GTC
Asp
>WENV170744686
LULX01006301
276974
Gammaproteobacteria
GGG
Pro
>WENV170744646
LULX01005440
458351
Gammaproteobacteria
TTG
Gln
>WENV170744291
LULX01000138
655198
Gammaproteobacteria
TTG
Gln
>WENV170744864
LULX01016236
276971
Gammaproteobacteria
ACG
Arg
>WENV170744283
LULX01000107
451784
Gammaproteobacteria
GAA
Phe
>WENV170745112
LULX01041072
276976
Gammaproteobacteria
TCT
Arg
>WENV170744320
LULX01000255
271458
Gammaproteobacteria
GGG
Pro
>WENV170744732
LULX01008314
271254
Gammaproteobacteria
CAT
Met
>WENV170744801
LULX01012262
464809
Gammaproteobacteria
GAA
Phe
>WENV170744279
LULX01000096
454972
Gammaproteobacteria
GTG
His
>WENV170744297
LULX01000150
275462
Gammaproteobacteria
TCT
Arg
>WENV170744494
LULX01002160
276973
Gammaproteobacteria
GAC
Val
>WENV170744473
LULX01001859
464214
Gammaproteobacteria
GGC
Ala
>WENV170744292
LULX01000138
112815
Gammaproteobacteria
CAG
Leu
>WENV170744888
LULX01017681
271287
Gammaproteobacteria
CAT
Met
>WENV170744226
LULX01000004
46215
Gammaproteobacteria
GCT
Ser
>WENV170744404
LULX01000959
452412
Gammaproteobacteria
GCC
Gly
>WENV170744225
LULX01000001
452412
Gammaproteobacteria
GCC
Gly
>WENV170744433
LULX01001219
458352
Gammaproteobacteria
TTG
Gln
>WENV170744590
LULX01003946
273850
Gammaproteobacteria
GAT
Ile
>WENV170744294
LULX01000143
271460
Gammaproteobacteria
CGG
Pro
>WENV170744435
LULX01001231
452404
Gammaproteobacteria
TGT
Thr
>WENV170744269
LULX01000078
271459
Gammaproteobacteria
CCT
Arg
>WENV170744889
LULX01017702
179960
Gammaproteobacteria
TAG
Leu
>WENV170744620
LULX01004771
273869
Gammaproteobacteria
GTT
Asn
>WENV170744238
LULX01000012
271200
Gammaproteobacteria
CAT
Met
>WENV170744227
LULX01000004
271456
Gammaproteobacteria
ACG
Arg
>WENV170744228
LULX01000004
271456
Gammaproteobacteria
ACG
Arg
>WENV170744845
LULX01015103
273754
Gammaproteobacteria
GTT
Asn
>WENV170744520
LULX01002485
451732
Gammaproteobacteria
GCC
Gly
>WENV170745012
LULX01029754
456709
Gammaproteobacteria
TGC
Ala
>WENV170744890
LULX01017702
779459
Gammaproteobacteria
CCA
Trp
>WENV170744224
LULX01000001
112371
Gammaproteobacteria
CAA
Leu
>WENV170744453
LULX01001565
452410
Gammaproteobacteria
TAC
Val
>WENV170744455
LULX01001565
452410
Gammaproteobacteria
TAC
Val
>WENV170744693
LULX01006539
276972
Gammaproteobacteria
CCA
Trp
>WENV170744431
LULX01001219
271286
Gammaproteobacteria
CAT
Met
>WENV170744727
LULX01008067
453897
Gammaproteobacteria
TAC
Val
>WENV170744432
LULX01001219
181084
Gammaproteobacteria
TAG
Leu
>WENV170744290
LULX01000138
180500
Gammaproteobacteria
TAG
Leu
>WENV170744254
LULX01000043
112817
Gammaproteobacteria
TAA
Leu
>WENV170744221
LULX01000001
452414
Gammaproteobacteria
TTC
Glu
>WENV170744232
LULX01000008
452414
Gammaproteobacteria
TTC
Glu
>WENV170744758
LULX01009740
276970
Gammaproteobacteria
CCG
Arg
>WENV170745111
LULX01041072
276975
Gammaproteobacteria
TGG
Pro
>WENV170744323
LULX01000267
30354
Gammaproteobacteria
TGA
Ser
>WENV170744325
LULX01000287
30354
Gammaproteobacteria
TGA
Ser
>WENV170744343
LULX01000402
30354
Gammaproteobacteria
TGA
Ser
>WENV170744566
LULX01003434
466186
Gammaproteobacteria
TGC
Ala
>WENV170744928
LULX01021132
273528
Gammaproteobacteria
GGG
Pro
>WENV170745134
LULX01043627
452407
Gammaproteobacteria
GAA
Phe
>WENV170744863
LULX01016236
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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