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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
192 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170921353
MDTG01012617
275843
Alphaproteobacteria
CCT
Arg
>WENV170931048
MDTG01177675
275828
Alphaproteobacteria
GTC
Asp
>WENV170941766
MDTG01365998
275828
Alphaproteobacteria
GTC
Asp
>WENV170940366
MDTG01341947
655365
Alphaproteobacteria
TTC
Glu
>WENV170940367
MDTG01341947
655365
Alphaproteobacteria
TTC
Glu
>WENV170924199
MDTG01061699
273797
Alphaproteobacteria
GGG
Pro
>WENV170940667
MDTG01346969
273797
Alphaproteobacteria
GGG
Pro
>WENV170942417
MDTG01377641
273797
Alphaproteobacteria
GGG
Pro
>WENV170944163
MDTG01409381
273797
Alphaproteobacteria
GGG
Pro
>WENV170932487
MDTG01203403
180489
Alphaproteobacteria
TAG
Leu
>WENV170935530
MDTG01258641
180489
Alphaproteobacteria
TAG
Leu
>WENV170921299
MDTG01011663
655167
Alphaproteobacteria
TTC
Glu
>WENV170925971
MDTG01092916
655167
Alphaproteobacteria
TTC
Glu
>WENV170938029
MDTG01302339
655167
Alphaproteobacteria
TTC
Glu
>WENV170940857
MDTG01350416
655167
Alphaproteobacteria
TTC
Glu
>WENV170940858
MDTG01350416
655167
Alphaproteobacteria
TTC
Glu
>WENV170932538
MDTG01204417
655421
Alphaproteobacteria
GGT
Thr
>WENV170940460
MDTG01343495
655421
Alphaproteobacteria
GGT
Thr
>WENV170922822
MDTG01038304
457318
Alphaproteobacteria
CGT
Thr
>WENV170936698
MDTG01279052
457318
Alphaproteobacteria
CGT
Thr
>WENV170921354
MDTG01012617
273805
Alphaproteobacteria
ACG
Arg
>WENV170927383
MDTG01116320
273805
Alphaproteobacteria
ACG
Arg
>WENV170932531
MDTG01204248
273805
Alphaproteobacteria
ACG
Arg
>WENV170932520
MDTG01203923
452884
Alphaproteobacteria
CCA
Trp
>WENV170933122
MDTG01215700
452884
Alphaproteobacteria
CCA
Trp
>WENV170936984
MDTG01284112
452884
Alphaproteobacteria
CCA
Trp
>WENV170939064
MDTG01319333
452884
Alphaproteobacteria
CCA
Trp
>WENV170939153
MDTG01321010
452884
Alphaproteobacteria
CCA
Trp
>WENV170922210
MDTG01027304
455289
Alphaproteobacteria
TTT
Lys
>WENV170935658
MDTG01260730
780486
Alphaproteobacteria
TCC
Gly
>WENV170935572
MDTG01259396
273452
Alphaproteobacteria
CAT
Met
>WENV170938496
MDTG01310087
653534
Alphaproteobacteria
GCC
Gly
>WENV170928622
MDTG01136595
30705
Alphaproteobacteria
GCT
Ser
>WENV170925597
MDTG01086550
45799
Alphaproteobacteria
GCT
Ser
>WENV170922515
MDTG01032430
180542
Alphaproteobacteria
TAG
Leu
>WENV170943462
MDTG01397744
112803
Alphaproteobacteria
CAG
Leu
>WENV170934220
MDTG01234502
46190
Alphaproteobacteria
GGA
Ser
>WENV170936590
MDTG01277240
46190
Alphaproteobacteria
GGA
Ser
>WENV170927729
MDTG01121873
270887
Alphaproteobacteria
TGG
Pro
>WENV170941009
MDTG01353229
30553
Alphaproteobacteria
GGA
Ser
>WENV170939348
MDTG01324610
780331
Alphaproteobacteria
TCC
Gly
>WENV170933264
MDTG01217809
780331
Alphaproteobacteria
TCC
Gly
>WENV170926068
MDTG01094368
780331
Alphaproteobacteria
TCC
Gly
>WENV170920671
MDTG01000823
780331
Alphaproteobacteria
TCC
Gly
>WENV170929823
MDTG01156746
454510
Alphaproteobacteria
CGT
Thr
>WENV170938497
MDTG01310087
655623
Alphaproteobacteria
GCC
Gly
>WENV170921218
MDTG01010263
275154
Alphaproteobacteria
GTG
His
>WENV170921794
MDTG01020063
218220
Alphaproteobacteria
>WENV170927653
MDTG01120590
218220
Alphaproteobacteria
>WENV170937882
MDTG01299506
218119
Alphaproteobacteria
>WENV170923074
MDTG01042647
218119
Alphaproteobacteria
>WENV170930891
MDTG01175255
454322
Alphaproteobacteria
TAC
Val
>WENV170921288
MDTG01011495
653538
Alphaproteobacteria
TTC
Glu
>WENV170935739
MDTG01262673
653538
Alphaproteobacteria
TTC
Glu
>WENV170932870
MDTG01211207
46035
Alphaproteobacteria
GGA
Ser
>WENV170933531
MDTG01222569
655171
Alphaproteobacteria
GGT
Thr
>WENV170923962
MDTG01058023
281026
Alphaproteobacteria
CAT
Met
>WENV170941286
MDTG01357856
281026
Alphaproteobacteria
CAT
Met
>WENV170924046
MDTG01059089
274224
Alphaproteobacteria
CAT
Met
>WENV170927743
MDTG01122031
274224
Alphaproteobacteria
CAT
Met
>WENV170932290
MDTG01199917
274224
Alphaproteobacteria
CAT
Met
>WENV170934076
MDTG01232082
274224
Alphaproteobacteria
CAT
Met
>WENV170936255
MDTG01272073
274224
Alphaproteobacteria
CAT
Met
>WENV170940380
MDTG01342294
274224
Alphaproteobacteria
CAT
Met
>WENV170942355
MDTG01376585
655359
Alphaproteobacteria
GAC
Val
>WENV170941868
MDTG01367858
456891
Alphaproteobacteria
CGT
Thr
>WENV170922680
MDTG01035514
452894
Alphaproteobacteria
CCA
Trp
>WENV170925910
MDTG01092278
452894
Alphaproteobacteria
CCA
Trp
>WENV170935747
MDTG01262798
452894
Alphaproteobacteria
CCA
Trp
>WENV170941477
MDTG01360885
278344
Alphaproteobacteria
CAT
Met
>WENV170938087
MDTG01303095
278344
Alphaproteobacteria
CAT
Met
>WENV170943724
MDTG01402334
653532
Alphaproteobacteria
GTT
Asn
>WENV170937012
MDTG01284689
653532
Alphaproteobacteria
GTT
Asn
>WENV170936173
MDTG01270501
653532
Alphaproteobacteria
GTT
Asn
>WENV170920650
MDTG01000536
653532
Alphaproteobacteria
GTT
Asn
>WENV170921711
MDTG01018945
653532
Alphaproteobacteria
GTT
Asn
>WENV170921888
MDTG01021941
653532
Alphaproteobacteria
GTT
Asn
>WENV170928672
MDTG01137547
653532
Alphaproteobacteria
GTT
Asn
>WENV170932908
MDTG01211782
19999
Alphaproteobacteria
GCT
Ser
>WENV170934512
MDTG01239855
19999
Alphaproteobacteria
GCT
Ser
>WENV170943199
MDTG01392299
19999
Alphaproteobacteria
GCT
Ser
>WENV170939843
MDTG01333009
655363
Alphaproteobacteria
GGT
Thr
>WENV170937222
MDTG01287999
655363
Alphaproteobacteria
GGT
Thr
>WENV170934485
MDTG01239199
655363
Alphaproteobacteria
GGT
Thr
>WENV170922076
MDTG01025044
655363
Alphaproteobacteria
GGT
Thr
>WENV170942947
MDTG01387477
274144
Alphaproteobacteria
GTG
His
>WENV170926074
MDTG01094551
273451
Alphaproteobacteria
GTG
His
>WENV170925347
MDTG01082496
455172
Alphaproteobacteria
GGC
Ala
>WENV170930862
MDTG01174828
276089
Alphaproteobacteria
CCG
Arg
>WENV170934520
MDTG01240135
273450
Alphaproteobacteria
TCT
Arg
>WENV170939051
MDTG01319210
273450
Alphaproteobacteria
TCT
Arg
>WENV170942238
MDTG01374329
273450
Alphaproteobacteria
TCT
Arg
>WENV170930944
MDTG01176157
655566
Alphaproteobacteria
GAC
Val
>WENV170939711
MDTG01330841
294326
Alphaproteobacteria
CCG
Arg
>WENV170940208
MDTG01339480
273801
Alphaproteobacteria
GTG
His
>WENV170927305
MDTG01115034
47329
Alphaproteobacteria
TGA
Ser
>WENV170935978
MDTG01266918
47329
Alphaproteobacteria
TGA
Ser
>WENV170934567
MDTG01240923
454059
Alphaproteobacteria
TTT
Lys
>WENV170929878
MDTG01157447
454059
Alphaproteobacteria
TTT
Lys
>WENV170920876
MDTG01004593
454059
Alphaproteobacteria
TTT
Lys
>WENV170923427
MDTG01049239
454059
Alphaproteobacteria
TTT
Lys
>WENV170929814
MDTG01156607
454059
Alphaproteobacteria
TTT
Lys
>WENV170921892
MDTG01021992
274138
Alphaproteobacteria
CAT
Met
>WENV170922984
MDTG01040833
274138
Alphaproteobacteria
CAT
Met
>WENV170927171
MDTG01112982
274138
Alphaproteobacteria
CAT
Met
>WENV170933625
MDTG01223844
113188
Alphaproteobacteria
GAG
Leu
>WENV170937652
MDTG01295243
113188
Alphaproteobacteria
GAG
Leu
>WENV170940265
MDTG01340297
113188
Alphaproteobacteria
GAG
Leu
>WENV170940851
MDTG01350263
180720
Alphaproteobacteria
TAG
Leu
>WENV170939551
MDTG01328087
655358
Alphaproteobacteria
TTG
Gln
>WENV170942790
MDTG01384655
655358
Alphaproteobacteria
TTG
Gln
>WENV170928882
MDTG01141136
46072
Alphaproteobacteria
GCT
Ser
>WENV170923220
MDTG01045779
270799
Alphaproteobacteria
CAT
Met
>WENV170931684
MDTG01189206
270799
Alphaproteobacteria
CAT
Met
>WENV170934469
MDTG01238911
270799
Alphaproteobacteria
CAT
Met
>WENV170921088
MDTG01008165
113418
Alphaproteobacteria
CAG
Leu
>WENV170920793
MDTG01003100
275730
Alphaproteobacteria
TGG
Pro
>WENV170936944
MDTG01283420
454512
Alphaproteobacteria
CCA
Trp
>WENV170940278
MDTG01340433
454512
Alphaproteobacteria
CCA
Trp
>WENV170923309
MDTG01047198
113228
Alphaproteobacteria
CAG
Leu
>WENV170942561
MDTG01380201
273803
Alphaproteobacteria
CCT
Arg
>WENV170928728
MDTG01138692
46044
Alphaproteobacteria
TGA
Ser
>WENV170924965
MDTG01074935
455360
Alphaproteobacteria
CGC
Ala
>WENV170928110
MDTG01128209
455360
Alphaproteobacteria
CGC
Ala
>WENV170931751
MDTG01190348
455360
Alphaproteobacteria
CGC
Ala
>WENV170936215
MDTG01271382
455360
Alphaproteobacteria
CGC
Ala
>WENV170943536
MDTG01398930
275157
Alphaproteobacteria
TGG
Pro
>WENV170931327
MDTG01182275
270796
Alphaproteobacteria
GTC
Asp
>WENV170941919
MDTG01368803
270796
Alphaproteobacteria
GTC
Asp
>WENV170937411
MDTG01291407
282325
Alphaproteobacteria
GTC
Asp
>WENV170937412
MDTG01291407
282325
Alphaproteobacteria
GTC
Asp
>WENV170935412
MDTG01256275
655361
Alphaproteobacteria
GCC
Gly
>WENV170936811
MDTG01280991
655361
Alphaproteobacteria
GCC
Gly
>WENV170937968
MDTG01301042
655361
Alphaproteobacteria
GCC
Gly
>WENV170938085
MDTG01303058
655361
Alphaproteobacteria
GCC
Gly
>WENV170941470
MDTG01360825
655361
Alphaproteobacteria
GCC
Gly
>WENV170944498
MDTG01416010
274141
Alphaproteobacteria
CCT
Arg
>WENV170920792
MDTG01003100
46262
Alphaproteobacteria
CGA
Ser
>WENV170928724
MDTG01138572
273603
Alphaproteobacteria
TGG
Pro
>WENV170924279
MDTG01063391
655271
Alphaproteobacteria
GGT
Thr
>WENV170924499
MDTG01066863
655271
Alphaproteobacteria
GGT
Thr
>WENV170942361
MDTG01376691
655271
Alphaproteobacteria
GGT
Thr
>WENV170922107
MDTG01025711
274133
Alphaproteobacteria
ACG
Arg
>WENV170925258
MDTG01080902
274133
Alphaproteobacteria
ACG
Arg
>WENV170931315
MDTG01182080
274133
Alphaproteobacteria
ACG
Arg
>WENV170942677
MDTG01382323
274133
Alphaproteobacteria
ACG
Arg
>WENV170942960
MDTG01387854
274133
Alphaproteobacteria
ACG
Arg
>WENV170943145
MDTG01391199
274133
Alphaproteobacteria
ACG
Arg
>WENV170941238
MDTG01356974
271956
Alphaproteobacteria
CAT
Met
>WENV170938461
MDTG01309654
271956
Alphaproteobacteria
CAT
Met
>WENV170922769
MDTG01037228
271956
Alphaproteobacteria
CAT
Met
>WENV170935970
MDTG01266798
780346
Alphaproteobacteria
CTG
Gln
>WENV170927298
MDTG01114835
655822
Alphaproteobacteria
GAC
Val
>WENV170942432
MDTG01377956
454504
Alphaproteobacteria
CAT
Met
>WENV170938010
MDTG01301974
270897
Alphaproteobacteria
CCT
Arg
>WENV170936952
MDTG01283547
656140
Alphaproteobacteria
GAC
Val
>WENV170921528
MDTG01016033
656140
Alphaproteobacteria
GAC
Val
>WENV170942147
MDTG01372731
20317
Alphaproteobacteria
GCT
Ser
>WENV170938938
MDTG01317370
671670
Alphaproteobacteria
CAC
Val
>WENV170944581
MDTG01417674
671670
Alphaproteobacteria
CAC
Val
>WENV170925463
MDTG01084353
112802
Alphaproteobacteria
GAG
Leu
>WENV170938301
MDTG01306390
113889
Alphaproteobacteria
CAG
Leu
>WENV170931317
MDTG01182108
780582
Alphaproteobacteria
TCC
Gly
>WENV170931030
MDTG01177421
780582
Alphaproteobacteria
TCC
Gly
>WENV170924958
MDTG01074806
780582
Alphaproteobacteria
TCC
Gly
>WENV170921902
MDTG01022193
780582
Alphaproteobacteria
TCC
Gly
>WENV170934440
MDTG01238506
31090
Alphaproteobacteria
GGA
Ser
>WENV170929673
MDTG01153976
31090
Alphaproteobacteria
GGA
Ser
>WENV170927838
MDTG01123627
31090
Alphaproteobacteria
GGA
Ser
>WENV170924901
MDTG01073860
31090
Alphaproteobacteria
GGA
Ser
>WENV170927360
MDTG01116044
454914
Alphaproteobacteria
TTT
Lys
>WENV170931356
MDTG01182855
454914
Alphaproteobacteria
TTT
Lys
>WENV170932626
MDTG01205805
454914
Alphaproteobacteria
TTT
Lys
>WENV170940826
MDTG01349933
454914
Alphaproteobacteria
TTT
Lys
>WENV170924763
MDTG01071183
112839
Alphaproteobacteria
CAG
Leu
>WENV170924966
MDTG01074935
112839
Alphaproteobacteria
CAG
Leu
>WENV170934915
MDTG01247308
112839
Alphaproteobacteria
CAG
Leu
>WENV170936393
MDTG01274452
281029
Alphaproteobacteria
GGG
Pro
>WENV170932065
MDTG01196177
281029
Alphaproteobacteria
GGG
Pro
>WENV170930336
MDTG01166208
281029
Alphaproteobacteria
GGG
Pro
>WENV170926176
MDTG01096341
281029
Alphaproteobacteria
GGG
Pro
>WENV170933532
MDTG01222569
654103
Alphaproteobacteria
GAA
Phe
>WENV170922632
MDTG01034521
780039
Alphaproteobacteria
GCA
Cys
>WENV170923549
MDTG01051115
780039
Alphaproteobacteria
GCA
Cys
>WENV170935971
MDTG01266798
780039
Alphaproteobacteria
GCA
Cys
>WENV170924751
MDTG01070980
275989
Alphaproteobacteria
CAT
Met
>WENV170927812
MDTG01123213
275989
Alphaproteobacteria
CAT
Met
>WENV170924454
MDTG01066222
295679
Alphaproteobacteria
CGG
Pro
>WENV170924453
MDTG01066222
295679
Alphaproteobacteria
CGG
Pro
>WENV170922109
MDTG01025785
658005
Alphaproteobacteria
GCC
Gly
>WENV170932613
MDTG01205574
180561
Alphaproteobacteria
TAG
Leu
>WENV170926323
MDTG01098304
654995
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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