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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170009293
APMI01000040
237240
Betaproteobacteria
CGC
Ala
>WENV170009332
APMI01000098
248752
Betaproteobacteria
GCC
Gly
>WENV170009334
APMI01000098
248752
Betaproteobacteria
GCC
Gly
>WENV170009336
APMI01000098
152520
Betaproteobacteria
ACG
Arg
>WENV170009337
APMI01000099
243641
Betaproteobacteria
TAC
Val
>WENV170009496
APMI01000423
147506
Betaproteobacteria
CAT
Met
>WENV170009516
APMI01000544
344175
Betaproteobacteria
CCC
Gly
>WENV170009517
APMI01000545
147079
Betaproteobacteria
TTG
Gln
>WENV170009540
APMI01000621
25281
Betaproteobacteria
CGA
Ser
>WENV170009600
APMI01000827
147079
Betaproteobacteria
TTG
Gln
>WENV170009702
APMI01001999
98424
Betaproteobacteria
CAA
Leu
>WENV170009719
APMI01002239
236872
Betaproteobacteria
CCA
Trp
>WENV170009846
APMI01003851
236872
Betaproteobacteria
CCA
Trp
>WENV170009856
APMI01003989
348115
Betaproteobacteria
CCT
Arg
>WENV170009982
APMI01006374
147506
Betaproteobacteria
CAT
Met
>WENV170010072
APMI01007752
98424
Betaproteobacteria
CAA
Leu
>WENV170010078
APMI01007911
236872
Betaproteobacteria
CCA
Trp
>WENV170010132
APMI01009418
25281
Betaproteobacteria
CGA
Ser
>WENV170010154
APMI01009839
239252
Betaproteobacteria
TTT
Lys
>WENV170010387
APMI01015442
236872
Betaproteobacteria
CCA
Trp
>WENV170010388
APMI01015501
96979
Betaproteobacteria
GAG
Leu
>WENV170010391
APMI01015611
45127
Betaproteobacteria
CGA
Ser
>WENV170010407
APMI01016219
152520
Betaproteobacteria
ACG
Arg
>WENV170010520
APMI01019314
239252
Betaproteobacteria
TTT
Lys
>WENV170010534
APMI01019694
152292
Betaproteobacteria
TTG
Gln
>WENV170010594
APMI01021806
25281
Betaproteobacteria
CGA
Ser
>WENV170010609
APMI01022452
239252
Betaproteobacteria
TTT
Lys
>WENV170010639
APMI01023364
146726
Betaproteobacteria
TCT
Arg
>WENV170010673
APMI01024702
249068
Betaproteobacteria
CGC
Ala
>WENV170010693
APMI01025490
249068
Betaproteobacteria
CGC
Ala
>WENV170010702
APMI01025708
25281
Betaproteobacteria
CGA
Ser
>WENV170010739
APMI01027024
251462
Betaproteobacteria
GCC
Gly
>WENV170010748
APMI01027446
152520
Betaproteobacteria
ACG
Arg
>WENV170010774
APMI01028520
237516
Betaproteobacteria
GCC
Gly
>WENV170010775
APMI01028520
412422
Betaproteobacteria
GCA
Cys
>WENV170010777
APMI01028520
237516
Betaproteobacteria
GCC
Gly
>WENV170010838
APMI01030984
23608
Betaproteobacteria
CGA
Ser
>WENV170010897
APMI01034007
147506
Betaproteobacteria
CAT
Met
>WENV170010899
APMI01034158
148851
Betaproteobacteria
CAT
Met
>WENV170010917
APMI01035089
251462
Betaproteobacteria
GCC
Gly
>WENV170010919
APMI01035089
251462
Betaproteobacteria
GCC
Gly
>WENV170011008
APMI01039198
145694
Betaproteobacteria
ACG
Arg
>WENV170011177
APMI01048022
146726
Betaproteobacteria
TCT
Arg
>WENV170011237
APMI01051627
147506
Betaproteobacteria
CAT
Met
>WENV170011261
APMI01053122
237516
Betaproteobacteria
GCC
Gly
>WENV170011363
APMI01060938
4907
Betaproteobacteria
GCT
Ser
>WENV170011500
APMI01069992
237516
Betaproteobacteria
GCC
Gly
>WENV170011501
APMI01069992
412422
Betaproteobacteria
GCA
Cys
>WENV170011524
APMI01072165
251517
Betaproteobacteria
TGT
Thr
>WENV170011593
APMI01076121
239140
Betaproteobacteria
TTT
Lys
>WENV170011607
APMI01076774
146726
Betaproteobacteria
TCT
Arg
>WENV170011630
APMI01078274
236872
Betaproteobacteria
CCA
Trp
>WENV170011637
APMI01078808
237326
Betaproteobacteria
CTT
Lys
>WENV170011736
APMI01086681
59085
Betaproteobacteria
TAG
Leu
>WENV170011749
APMI01087590
148851
Betaproteobacteria
CAT
Met
>WENV170011837
APMI01094992
147079
Betaproteobacteria
TTG
Gln
>WENV170011839
APMI01095670
98424
Betaproteobacteria
CAA
Leu
>WENV170011879
APMI01098647
145694
Betaproteobacteria
ACG
Arg
>WENV170011882
APMI01099014
45127
Betaproteobacteria
CGA
Ser
>WENV170011976
APMI01107515
145694
Betaproteobacteria
ACG
Arg
>WENV170012251
APMI01142758
45127
Betaproteobacteria
CGA
Ser
>WENV170012279
APMI01145673
251462
Betaproteobacteria
GCC
Gly
>WENV170012288
APMI01147007
154591
Betaproteobacteria
CAT
Met
>WENV170012315
APMI01152538
159509
Betaproteobacteria
CAT
Met
>WENV170012377
APMI01164575
348115
Betaproteobacteria
CCT
Arg
>WENV170012411
APMI01170733
348115
Betaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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