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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170653136
JRYI01006043
253279
Betaproteobacteria
GTG
His
>WENV170653082
JRYI01002626
96057
Betaproteobacteria
GAG
Leu
>WENV170653135
JRYI01006043
147509
Betaproteobacteria
TCT
Arg
>WENV170653016
JRYI01000849
339413
Betaproteobacteria
GGT
Thr
>WENV170653160
JRYI01008633
339413
Betaproteobacteria
GGT
Thr
>WENV170653192
JRYI01015480
145694
Betaproteobacteria
ACG
Arg
>WENV170653174
JRYI01010809
239294
Betaproteobacteria
GCC
Gly
>WENV170653025
JRYI01000895
251462
Betaproteobacteria
GCC
Gly
>WENV170653159
JRYI01008633
251462
Betaproteobacteria
GCC
Gly
>WENV170653094
JRYI01003006
243641
Betaproteobacteria
TAC
Val
>WENV170653123
JRYI01004626
98799
Betaproteobacteria
TAG
Leu
>WENV170653108
JRYI01004138
238203
Betaproteobacteria
TGT
Thr
>WENV170653100
JRYI01003350
253278
Betaproteobacteria
TTT
Lys
>WENV170653226
JRYI01024372
4681
Betaproteobacteria
GCT
Ser
>WENV170653268
JRYI01040235
95723
Betaproteobacteria
CAG
Leu
>WENV170653203
JRYI01016120
238206
Betaproteobacteria
CTT
Lys
>WENV170653205
JRYI01016349
253284
Betaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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