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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170678579
LDZU01002623
358256
Euryarchaeota
>WENV170678578
LDZU01002623
339840
Euryarchaeota
>WENV170678702
LDZU01003943
147815
Euryarchaeota
CAC
Val
>WENV170678690
LDZU01003814
127582
Euryarchaeota
CAT
Met
>WENV170678765
LDZU01004237
127582
Euryarchaeota
CAT
Met
>WENV170678694
LDZU01003913
45268
Euryarchaeota
CGA
Ser
>WENV170678642
LDZU01003528
339971
Euryarchaeota
GCC
Gly
>WENV170678682
LDZU01003737
339971
Euryarchaeota
GCC
Gly
>WENV170678709
LDZU01003971
339971
Euryarchaeota
GCC
Gly
>WENV170678739
LDZU01004206
339971
Euryarchaeota
GCC
Gly
>WENV170678670
LDZU01003608
45267
Euryarchaeota
GCT
Ser
>WENV170678713
LDZU01004011
45267
Euryarchaeota
GCT
Ser
>WENV170678763
LDZU01004231
45267
Euryarchaeota
GCT
Ser
>WENV170678720
LDZU01004074
238541
Euryarchaeota
GTT
Asn
>WENV170678665
LDZU01003570
256153
Euryarchaeota
GTT
Asn
>WENV170678691
LDZU01003835
411995
Euryarchaeota
TCC
Gly
>WENV170678701
LDZU01003943
411995
Euryarchaeota
TCC
Gly
>WENV170678731
LDZU01004204
411995
Euryarchaeota
TCC
Gly
>WENV170678647
LDZU01003535
129634
Euryarchaeota
TCT
Arg
>WENV170678577
LDZU01002606
147573
Euryarchaeota
TGC
Ala
>WENV170678699
LDZU01003937
147814
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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