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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180043122
LQAH01002958
256453
Thermodesulfobacteriota
TGC
Ala
>WENV180043257
LQAH01016867
161078
Thermodesulfobacteriota
ACG
Arg
>WENV180043228
LQAH01012516
269764
Thermodesulfobacteriota
GGC
Ala
>WENV180043382
LQAH01038621
269764
Thermodesulfobacteriota
GGC
Ala
>WENV180043351
LQAH01034481
349351
Thermodesulfobacteriota
CTG
Gln
>WENV180042947
LQAH01000014
174262
Thermodesulfobacteriota
GTC
Asp
>WENV180042949
LQAH01000014
174262
Thermodesulfobacteriota
GTC
Asp
>WENV180042942
LQAH01000011
152132
Thermodesulfobacteriota
CAT
Met
>WENV180043209
LQAH01010676
194956
Thermodesulfobacteriota
GGG
Pro
>WENV180043222
LQAH01012407
194956
Thermodesulfobacteriota
GGG
Pro
>WENV180043338
LQAH01031993
256449
Thermodesulfobacteriota
GTG
His
>WENV180043169
LQAH01005441
242869
Thermodesulfobacteriota
GTT
Asn
>WENV180043337
LQAH01031901
161086
Thermodesulfobacteriota
CAT
Met
>WENV180043360
LQAH01036611
62195
Thermodesulfobacteriota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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