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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170766484
LWDU01041778
183605
Gammaproteobacteria
CCG
Arg
>WENV170765487
LWDU01037652
279385
Gammaproteobacteria
TTT
Lys
>WENV170766633
LWDU01042322
238438
Gammaproteobacteria
>WENV170766241
LWDU01041036
281920
Gammaproteobacteria
CCA
Trp
>WENV170766504
LWDU01041822
281920
Gammaproteobacteria
CCA
Trp
>WENV170766535
LWDU01041973
281920
Gammaproteobacteria
CCA
Trp
>WENV170766632
LWDU01042321
283668
Gammaproteobacteria
TTT
Lys
>WENV170765003
LWDU01034432
61925
Gammaproteobacteria
TAA
Leu
>WENV170763115
LWDU01002284
171935
Gammaproteobacteria
ACG
Arg
>WENV170766681
LWDU01042424
236366
Gammaproteobacteria
GTG
His
>WENV170766820
LWDU01043024
236366
Gammaproteobacteria
GTG
His
>WENV170765517
LWDU01037697
240619
Gammaproteobacteria
TGT
Thr
>WENV170763730
LWDU01018022
240642
Gammaproteobacteria
GTT
Asn
>WENV170766679
LWDU01042424
159514
Gammaproteobacteria
TGG
Pro
>WENV170763980
LWDU01026478
276551
Gammaproteobacteria
GAA
Phe
>WENV170763982
LWDU01026488
276551
Gammaproteobacteria
GAA
Phe
>WENV170764038
LWDU01028044
276551
Gammaproteobacteria
GAA
Phe
>WENV170766750
LWDU01042644
276551
Gammaproteobacteria
GAA
Phe
>WENV170766786
LWDU01042765
276551
Gammaproteobacteria
GAA
Phe
>WENV170767060
LWDU01044241
276551
Gammaproteobacteria
GAA
Phe
>WENV170765237
LWDU01036031
174801
Gammaproteobacteria
TGG
Pro
>WENV170765492
LWDU01037657
174801
Gammaproteobacteria
TGG
Pro
>WENV170765231
LWDU01035978
45345
Gammaproteobacteria
GGA
Ser
>WENV170764737
LWDU01033299
426403
Gammaproteobacteria
GCA
Cys
>WENV170764940
LWDU01034268
426403
Gammaproteobacteria
GCA
Cys
>WENV170762821
LWDU01000016
175987
Gammaproteobacteria
CGG
Pro
>WENV170764122
LWDU01030945
175987
Gammaproteobacteria
CGG
Pro
>WENV170765243
LWDU01036117
421020
Gammaproteobacteria
GCA
Cys
>WENV170763574
LWDU01012698
247974
Gammaproteobacteria
CCA
Trp
>WENV170766774
LWDU01042685
247974
Gammaproteobacteria
CCA
Trp
>WENV170766791
LWDU01042810
247974
Gammaproteobacteria
CCA
Trp
>WENV170767065
LWDU01044244
247974
Gammaproteobacteria
CCA
Trp
>WENV170766233
LWDU01041016
237412
Gammaproteobacteria
TAC
Val
>WENV170766493
LWDU01041789
237412
Gammaproteobacteria
TAC
Val
>WENV170766520
LWDU01041936
237412
Gammaproteobacteria
TAC
Val
>WENV170763728
LWDU01017996
237412
Gammaproteobacteria
TAC
Val
>WENV170766760
LWDU01042658
162634
Gammaproteobacteria
GTC
Asp
>WENV170766789
LWDU01042775
162634
Gammaproteobacteria
GTC
Asp
>WENV170765519
LWDU01037697
412476
Gammaproteobacteria
TCC
Gly
>WENV170763915
LWDU01024496
279906
Gammaproteobacteria
TGC
Ala
>WENV170764951
LWDU01034280
145713
Gammaproteobacteria
CAT
Met
>WENV170766218
LWDU01040999
237418
Gammaproteobacteria
GTT
Asn
>WENV170766491
LWDU01041787
237418
Gammaproteobacteria
GTT
Asn
>WENV170763306
LWDU01006478
411842
Gammaproteobacteria
GCA
Cys
>WENV170763550
LWDU01012163
411842
Gammaproteobacteria
GCA
Cys
>WENV170766803
LWDU01042886
411842
Gammaproteobacteria
GCA
Cys
>WENV170767053
LWDU01044225
411842
Gammaproteobacteria
GCA
Cys
>WENV170762844
LWDU01000066
16396
Gammaproteobacteria
TGA
Ser
>WENV170763959
LWDU01025746
148452
Gammaproteobacteria
CCT
Arg
>WENV170764070
LWDU01029195
241136
Gammaproteobacteria
TTG
Gln
>WENV170765502
LWDU01037665
241136
Gammaproteobacteria
TTG
Gln
>WENV170766244
LWDU01041039
278793
Gammaproteobacteria
GTG
His
>WENV170766488
LWDU01041786
278793
Gammaproteobacteria
GTG
His
>WENV170766516
LWDU01041929
278793
Gammaproteobacteria
GTG
His
>WENV170766594
LWDU01042192
278793
Gammaproteobacteria
GTG
His
>WENV170764142
LWDU01031558
250885
Gammaproteobacteria
TGC
Ala
>WENV170763219
LWDU01004426
425813
Gammaproteobacteria
GCA
Cys
>WENV170764099
LWDU01030223
144995
Gammaproteobacteria
GAT
Ile
>WENV170764684
LWDU01033254
186449
Gammaproteobacteria
TGG
Pro
>WENV170765131
LWDU01035160
186449
Gammaproteobacteria
TGG
Pro
>WENV170765190
LWDU01035499
186449
Gammaproteobacteria
TGG
Pro
>WENV170765007
LWDU01034435
128930
Gammaproteobacteria
GTC
Asp
>WENV170766677
LWDU01042402
128930
Gammaproteobacteria
GTC
Asp
>WENV170764135
LWDU01031342
262546
Gammaproteobacteria
TGC
Ala
>WENV170763160
LWDU01003272
237421
Gammaproteobacteria
TGT
Thr
>WENV170766564
LWDU01042046
247088
Gammaproteobacteria
CCA
Trp
>WENV170763724
LWDU01017916
237159
Gammaproteobacteria
GTG
His
>WENV170763298
LWDU01006242
16840
Gammaproteobacteria
GGA
Ser
>WENV170765500
LWDU01037662
411735
Gammaproteobacteria
GCA
Cys
>WENV170764109
LWDU01030384
240536
Gammaproteobacteria
TTT
Lys
>WENV170765317
LWDU01037114
241480
Gammaproteobacteria
CTT
Lys
>WENV170765503
LWDU01037668
175964
Gammaproteobacteria
CAT
Met
>WENV170763723
LWDU01017916
144998
Gammaproteobacteria
TCT
Arg
>WENV170765230
LWDU01035958
277196
Gammaproteobacteria
GAA
Phe
>WENV170764729
LWDU01033295
45439
Gammaproteobacteria
GGA
Ser
>WENV170763237
LWDU01004935
270352
Gammaproteobacteria
GCC
Gly
>WENV170763305
LWDU01006478
270352
Gammaproteobacteria
GCC
Gly
>WENV170763549
LWDU01012163
270352
Gammaproteobacteria
GCC
Gly
>WENV170766698
LWDU01042450
270352
Gammaproteobacteria
GCC
Gly
>WENV170766771
LWDU01042675
270352
Gammaproteobacteria
GCC
Gly
>WENV170767052
LWDU01044225
270352
Gammaproteobacteria
GCC
Gly
>WENV170763138
LWDU01002700
59485
Gammaproteobacteria
CAG
Leu
>WENV170764005
LWDU01027101
173617
Gammaproteobacteria
GTC
Asp
>WENV170763206
LWDU01004255
344326
Gammaproteobacteria
TTC
Glu
>WENV170766766
LWDU01042667
344326
Gammaproteobacteria
TTC
Glu
>WENV170765520
LWDU01037697
239187
Gammaproteobacteria
GGT
Thr
>WENV170763240
LWDU01004989
133560
Gammaproteobacteria
GAT
Ile
>WENV170767077
LWDU01044285
133560
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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