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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183735667
PJUB01000385
146896
Betaproteobacteria
TTG
Gln
>WENV183735904
PJUB01010133
248752
Betaproteobacteria
GCC
Gly
>WENV183735906
PJUB01010133
248752
Betaproteobacteria
GCC
Gly
>WENV183735964
PJUB01020537
248752
Betaproteobacteria
GCC
Gly
>WENV183735966
PJUB01020537
248752
Betaproteobacteria
GCC
Gly
>WENV183735992
PJUB01026035
248752
Betaproteobacteria
GCC
Gly
>WENV183735590
PJUB01000108
303627
Betaproteobacteria
TTT
Lys
>WENV183735675
PJUB01000475
145694
Betaproteobacteria
ACG
Arg
>WENV183735676
PJUB01000475
145694
Betaproteobacteria
ACG
Arg
>WENV183735931
PJUB01012834
146768
Betaproteobacteria
CAT
Met
>WENV183735589
PJUB01000104
16378
Betaproteobacteria
GGA
Ser
>WENV183735726
PJUB01000932
45122
Betaproteobacteria
TGA
Ser
>WENV183735645
PJUB01000310
412167
Betaproteobacteria
GCA
Cys
>WENV183735718
PJUB01000856
61762
Betaproteobacteria
TAA
Leu
>WENV183735580
PJUB01000082
251202
Betaproteobacteria
TGT
Thr
>WENV183735905
PJUB01010133
412127
Betaproteobacteria
GCA
Cys
>WENV183735965
PJUB01020537
412127
Betaproteobacteria
GCA
Cys
>WENV183735588
PJUB01000103
95951
Betaproteobacteria
CAA
Leu
>WENV183735808
PJUB01003497
145695
Betaproteobacteria
GGG
Pro
>WENV183735816
PJUB01003710
238346
Betaproteobacteria
CGT
Thr
>WENV183735664
PJUB01000377
339484
Betaproteobacteria
CCT
Arg
>WENV183735818
PJUB01003852
292518
Betaproteobacteria
TTT
Lys
>WENV183735797
PJUB01002787
238349
Betaproteobacteria
CTT
Lys
>WENV183735798
PJUB01002787
238349
Betaproteobacteria
CTT
Lys
>WENV183735921
PJUB01011556
238349
Betaproteobacteria
CTT
Lys
>WENV183735628
PJUB01000261
95934
Betaproteobacteria
GAG
Leu
>WENV183735619
PJUB01000219
339485
Betaproteobacteria
CAC
Val
>WENV183735791
PJUB01002603
4869
Betaproteobacteria
GCT
Ser
>WENV183735691
PJUB01000641
415147
Betaproteobacteria
CCC
Gly
>WENV183735817
PJUB01003745
147855
Betaproteobacteria
TTG
Gln
>WENV183735932
PJUB01013056
147855
Betaproteobacteria
TTG
Gln
>WENV183735935
PJUB01013961
147855
Betaproteobacteria
TTG
Gln
>WENV183735749
PJUB01001239
151824
Betaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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