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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
144 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183738474
PJUE01000004
146962
Bacteroidota
CAT
Met
>WENV183738581
PJUE01000027
165001
Bacteroidota
GTT
Asn
>WENV183738857
PJUE01000306
412419
Bacteroidota
CCA
Trp
>WENV183738967
PJUE01000656
412419
Bacteroidota
CCA
Trp
>WENV183738985
PJUE01000740
412419
Bacteroidota
CCA
Trp
>WENV183738639
PJUE01000057
147867
Bacteroidota
GTG
His
>WENV183738640
PJUE01000057
147867
Bacteroidota
GTG
His
>WENV183738692
PJUE01000109
147867
Bacteroidota
GTG
His
>WENV183738693
PJUE01000109
147867
Bacteroidota
GTG
His
>WENV183739011
PJUE01000902
145315
Bacteroidota
CAT
Met
>WENV183738555
PJUE01000020
147864
Bacteroidota
TGG
Pro
>WENV183738721
PJUE01000128
147864
Bacteroidota
TGG
Pro
>WENV183738921
PJUE01000446
147864
Bacteroidota
TGG
Pro
>WENV183738922
PJUE01000446
147864
Bacteroidota
TGG
Pro
>WENV183738923
PJUE01000446
147864
Bacteroidota
TGG
Pro
>WENV183739026
PJUE01000980
147864
Bacteroidota
TGG
Pro
>WENV183739068
PJUE01001404
147864
Bacteroidota
TGG
Pro
>WENV183739069
PJUE01001404
147864
Bacteroidota
TGG
Pro
>WENV183739070
PJUE01001404
147864
Bacteroidota
TGG
Pro
>WENV183739209
PJUE01003193
147864
Bacteroidota
TGG
Pro
>WENV183739401
PJUE01013909
147864
Bacteroidota
TGG
Pro
>WENV183738618
PJUE01000042
147942
Bacteroidota
GTC
Asp
>WENV183738619
PJUE01000042
147942
Bacteroidota
GTC
Asp
>WENV183738641
PJUE01000057
45276
Bacteroidota
TGA
Ser
>WENV183738748
PJUE01000149
45276
Bacteroidota
TGA
Ser
>WENV183738838
PJUE01000279
45276
Bacteroidota
TGA
Ser
>WENV183739012
PJUE01000909
45276
Bacteroidota
TGA
Ser
>WENV183739065
PJUE01001366
45276
Bacteroidota
TGA
Ser
>WENV183739130
PJUE01002051
45276
Bacteroidota
TGA
Ser
>WENV183739524
PJUE01028231
45276
Bacteroidota
TGA
Ser
>WENV183738703
PJUE01000117
313065
Bacteroidota
>WENV183738603
PJUE01000038
119517
Bacteroidota
CAA
Leu
>WENV183738643
PJUE01000057
119517
Bacteroidota
CAA
Leu
>WENV183738694
PJUE01000109
119517
Bacteroidota
CAA
Leu
>WENV183738840
PJUE01000284
119517
Bacteroidota
CAA
Leu
>WENV183738768
PJUE01000179
51937
Bacteroidota
TAA
Leu
>WENV183739132
PJUE01002078
51937
Bacteroidota
TAA
Leu
>WENV183739484
PJUE01023357
51937
Bacteroidota
TAA
Leu
>WENV183738623
PJUE01000043
119907
Bacteroidota
CAA
Leu
>WENV183738477
PJUE01000004
238872
Bacteroidota
TTT
Lys
>WENV183738552
PJUE01000019
235817
Bacteroidota
GAA
Phe
>WENV183738553
PJUE01000019
235817
Bacteroidota
GAA
Phe
>WENV183738937
PJUE01000532
235817
Bacteroidota
GAA
Phe
>WENV183739166
PJUE01002563
235817
Bacteroidota
GAA
Phe
>WENV183738717
PJUE01000127
147755
Bacteroidota
GTG
His
>WENV183738718
PJUE01000127
147755
Bacteroidota
GTG
His
>WENV183738556
PJUE01000020
59351
Bacteroidota
GAG
Leu
>WENV183738823
PJUE01000257
59351
Bacteroidota
GAG
Leu
>WENV183738940
PJUE01000546
59351
Bacteroidota
GAG
Leu
>WENV183738459
PJUE01000002
368129
Bacteroidota
CCT
Arg
>WENV183738455
PJUE01000002
25279
Bacteroidota
GGA
Ser
>WENV183738505
PJUE01000007
25279
Bacteroidota
GGA
Ser
>WENV183739152
PJUE01002378
145683
Bacteroidota
TGC
Ala
>WENV183738593
PJUE01000034
412188
Bacteroidota
TTG
Gln
>WENV183738578
PJUE01000027
127221
Bacteroidota
TAC
Val
>WENV183738579
PJUE01000027
127221
Bacteroidota
TAC
Val
>WENV183738853
PJUE01000306
267483
Bacteroidota
TGT
Thr
>WENV183738890
PJUE01000358
338625
Bacteroidota
TTC
Glu
>WENV183739237
PJUE01004296
338625
Bacteroidota
TTC
Glu
>WENV183739238
PJUE01004296
338625
Bacteroidota
TTC
Glu
>WENV183738695
PJUE01000116
236125
Bacteroidota
GAA
Phe
>WENV183738696
PJUE01000116
236125
Bacteroidota
GAA
Phe
>WENV183738697
PJUE01000116
236125
Bacteroidota
GAA
Phe
>WENV183738698
PJUE01000116
236125
Bacteroidota
GAA
Phe
>WENV183738485
PJUE01000005
268513
Bacteroidota
TCC
Gly
>WENV183738855
PJUE01000306
267805
Bacteroidota
TCC
Gly
>WENV183739447
PJUE01018021
267805
Bacteroidota
TCC
Gly
>WENV183738630
PJUE01000053
237429
Bacteroidota
TTT
Lys
>WENV183738896
PJUE01000376
237429
Bacteroidota
TTT
Lys
>WENV183738701
PJUE01000117
161616
Bacteroidota
CAT
Met
>WENV183738473
PJUE01000004
168744
Bacteroidota
GTG
His
>WENV183738481
PJUE01000005
119530
Bacteroidota
CAA
Leu
>WENV183738487
PJUE01000005
412439
Bacteroidota
CCA
Trp
>WENV183738475
PJUE01000004
238671
Bacteroidota
TTT
Lys
>WENV183738598
PJUE01000034
412189
Bacteroidota
CCA
Trp
>WENV183738631
PJUE01000053
127215
Bacteroidota
TAC
Val
>WENV183738632
PJUE01000053
127215
Bacteroidota
TAC
Val
>WENV183738691
PJUE01000108
127215
Bacteroidota
TAC
Val
>WENV183738877
PJUE01000333
127215
Bacteroidota
TAC
Val
>WENV183738898
PJUE01000379
127215
Bacteroidota
TAC
Val
>WENV183738901
PJUE01000393
127215
Bacteroidota
TAC
Val
>WENV183738903
PJUE01000393
127215
Bacteroidota
TAC
Val
>WENV183739156
PJUE01002398
127215
Bacteroidota
TAC
Val
>WENV183739157
PJUE01002398
127215
Bacteroidota
TAC
Val
>WENV183738480
PJUE01000005
413661
Bacteroidota
GCA
Cys
>WENV183738621
PJUE01000042
340605
Bacteroidota
TTC
Glu
>WENV183738506
PJUE01000007
238600
Bacteroidota
CAT
Met
>WENV183738666
PJUE01000077
238600
Bacteroidota
CAT
Met
>WENV183738667
PJUE01000077
238600
Bacteroidota
CAT
Met
>WENV183738668
PJUE01000077
238600
Bacteroidota
CAT
Met
>WENV183738750
PJUE01000154
238600
Bacteroidota
CAT
Met
>WENV183738751
PJUE01000154
238600
Bacteroidota
CAT
Met
>WENV183739589
PJUE01035717
238600
Bacteroidota
CAT
Met
>WENV183739610
PJUE01040172
238600
Bacteroidota
CAT
Met
>WENV183739611
PJUE01040172
238600
Bacteroidota
CAT
Met
>WENV183739689
PJUE01054278
238600
Bacteroidota
CAT
Met
>WENV183739692
PJUE01054294
238600
Bacteroidota
CAT
Met
>WENV183739693
PJUE01054294
238600
Bacteroidota
CAT
Met
>WENV183739448
PJUE01018021
342824
Bacteroidota
GGT
Thr
>WENV183738972
PJUE01000693
199370
Bacteroidota
GTT
Asn
>WENV183738458
PJUE01000002
412441
Bacteroidota
TTG
Gln
>WENV183738876
PJUE01000333
126680
Bacteroidota
TAC
Val
>WENV183738902
PJUE01000393
126680
Bacteroidota
TAC
Val
>WENV183739168
PJUE01002565
411719
Bacteroidota
GCA
Cys
>WENV183739198
PJUE01002986
411719
Bacteroidota
GCA
Cys
>WENV183738471
PJUE01000004
238670
Bacteroidota
GCC
Gly
>WENV183738457
PJUE01000002
54270
Bacteroidota
TGA
Ser
>WENV183738716
PJUE01000126
147944
Bacteroidota
TCT
Arg
>WENV183738671
PJUE01000083
25256
Bacteroidota
GCT
Ser
>WENV183738720
PJUE01000128
25256
Bacteroidota
GCT
Ser
>WENV183738590
PJUE01000034
236055
Bacteroidota
TCC
Gly
>WENV183738591
PJUE01000034
236055
Bacteroidota
TCC
Gly
>WENV183738592
PJUE01000034
236055
Bacteroidota
TCC
Gly
>WENV183738990
PJUE01000770
235822
Bacteroidota
TGT
Thr
>WENV183738991
PJUE01000770
235822
Bacteroidota
TGT
Thr
>WENV183738992
PJUE01000770
235822
Bacteroidota
TGT
Thr
>WENV183738783
PJUE01000189
235822
Bacteroidota
TGT
Thr
>WENV183738755
PJUE01000157
149231
Bacteroidota
TCT
Arg
>WENV183739630
PJUE01044731
149231
Bacteroidota
TCT
Arg
>WENV183738478
PJUE01000004
251411
Bacteroidota
GAA
Phe
>WENV183738479
PJUE01000004
251411
Bacteroidota
GAA
Phe
>WENV183739010
PJUE01000902
147863
Bacteroidota
CAT
Met
>WENV183739127
PJUE01002040
147863
Bacteroidota
CAT
Met
>WENV183739128
PJUE01002040
147863
Bacteroidota
CAT
Met
>WENV183738595
PJUE01000034
150454
Bacteroidota
TGT
Thr
>WENV183738486
PJUE01000005
342872
Bacteroidota
GGT
Thr
>WENV183738714
PJUE01000126
45935
Bacteroidota
GCT
Ser
>WENV183738803
PJUE01000218
242581
Bacteroidota
TTT
Lys
>WENV183738804
PJUE01000218
242581
Bacteroidota
TTT
Lys
>WENV183738879
PJUE01000345
242581
Bacteroidota
TTT
Lys
>WENV183738881
PJUE01000345
242581
Bacteroidota
TTT
Lys
>WENV183738629
PJUE01000052
49675
Bacteroidota
TGA
Ser
>WENV183738904
PJUE01000402
49675
Bacteroidota
TGA
Ser
>WENV183738538
PJUE01000014
16286
Bacteroidota
GGA
Ser
>WENV183738476
PJUE01000004
82649
Bacteroidota
GAG
Leu
>WENV183738470
PJUE01000004
96124
Bacteroidota
TAG
Leu
>WENV183738582
PJUE01000028
237427
Bacteroidota
TGT
Thr
>WENV183738583
PJUE01000028
237427
Bacteroidota
TGT
Thr
>WENV183738800
PJUE01000213
237427
Bacteroidota
TGT
Thr
>WENV183738620
PJUE01000042
340028
Bacteroidota
TTC
Glu
>WENV183738557
PJUE01000020
432941
Bacteroidota
GCA
Cys
>WENV183738456
PJUE01000002
179613
Bacteroidota
CAT
Met
>WENV183738655
PJUE01000062
179613
Bacteroidota
CAT
Met
>WENV183738483
PJUE01000005
147941
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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