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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1014651
SRR023845.241331
235653
Actinomycetota
CTC
Glu
>SRA1015022
SRR023845.424983
237356
Actinomycetota
CTT
Lys
>SRA1014494
SRR023845.163944
146956
Actinomycetota
CAT
Met
>SRA1015277
SRR023845.536609
146956
Actinomycetota
CAT
Met
>SRA1014394
SRR023845.118773
421039
Actinomycetota
TCC
Gly
>SRA1014721
SRR023845.282491
248046
Actinomycetota
CCA
Trp
>SRA1014898
SRR023845.370036
24389
Actinomycetota
CGA
Ser
>SRA1015260
SRR023845.525549
339308
Actinomycetota
CTG
Gln
>SRA1014765
SRR023845.304271
236241
Actinomycetota
TAC
Val
>SRA1014281
SRR023845.69644
339524
Actinomycetota
CCG
Arg
>SRA1014541
SRR023845.190617
339524
Actinomycetota
CCG
Arg
>SRA1014847
SRR023845.341449
339524
Actinomycetota
CCG
Arg
>SRA1014165
SRR023845.22967
95988
Actinomycetota
TAG
Leu
>SRA1014228
SRR023845.46442
243274
Actinomycetota
GGT
Thr
>SRA1015021
SRR023845.424782
417127
Actinomycetota
CCC
Gly
>SRA1014909
SRR023845.377137
237876
Actinomycetota
GTT
Asn
>SRA1015242
SRR023845.516619
237876
Actinomycetota
GTT
Asn
>SRA1015000
SRR023845.418172
145129
Actinomycetota
TAA
Leu
>SRA1014972
SRR023845.404035
238342
Actinomycetota
TTC
Glu
>SRA1015187
SRR023845.491907
338763
Actinomycetota
GCC
Gly
>SRA1014223
SRR023845.44619
146607
Actinomycetota
GTC
Asp
>SRA1014348
SRR023845.98686
146607
Actinomycetota
GTC
Asp
>SRA1014770
SRR023845.307508
146607
Actinomycetota
GTC
Asp
>SRA1014595
SRR023845.216358
278124
Actinomycetota
CTT
Lys
>SRA1014413
SRR023845.127366
339318
Actinomycetota
CAC
Val
>SRA1015195
SRR023845.495916
339318
Actinomycetota
CAC
Val
>SRA1015201
SRR023845.497204
243603
Actinomycetota
ACG
Arg
>SRA1014714
SRR023845.276697
243250
Actinomycetota
CGT
Thr
>SRA1014378
SRR023845.113966
95952
Actinomycetota
TAG
Leu
>SRA1014746
SRR023845.297246
411693
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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