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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170002229
AGSF01000970
180445
Cyanobacteriota
CAT
Met
>WENV170002230
AGSF01000970
180445
Cyanobacteriota
CAT
Met
>WENV170002189
AGSF01000084
288926
Cyanobacteriota
CAT
Met
>WENV170002225
AGSF01000936
176845
Cyanobacteriota
GTC
Asp
>WENV170002288
AGSF01004828
176845
Cyanobacteriota
GTC
Asp
>WENV170002309
AGSF01009838
176845
Cyanobacteriota
GTC
Asp
>WENV170002194
AGSF01000183
486380
Cyanobacteriota
TCC
Gly
>WENV170002289
AGSF01004911
486380
Cyanobacteriota
TCC
Gly
>WENV170002204
AGSF01000568
183793
Cyanobacteriota
>WENV170002187
AGSF01000049
288672
Cyanobacteriota
GTG
His
>WENV170002251
AGSF01001470
288672
Cyanobacteriota
GTG
His
>WENV170002240
AGSF01001047
281061
Cyanobacteriota
CCA
Trp
>WENV170002293
AGSF01006105
281061
Cyanobacteriota
CCA
Trp
>WENV170002316
AGSF01011223
281061
Cyanobacteriota
CCA
Trp
>WENV170002269
AGSF01002194
399139
Cyanobacteriota
GTT
Asn
>WENV170002243
AGSF01001095
482403
Cyanobacteriota
GCA
Cys
>WENV170002256
AGSF01001548
482403
Cyanobacteriota
GCA
Cys
>WENV170002323
AGSF01012932
482403
Cyanobacteriota
GCA
Cys
>WENV170002207
AGSF01000729
176784
Cyanobacteriota
CGG
Pro
>WENV170002291
AGSF01005258
176784
Cyanobacteriota
CGG
Pro
>WENV170002305
AGSF01008803
288544
Cyanobacteriota
TGC
Ala
>WENV170002259
AGSF01001637
288544
Cyanobacteriota
TGC
Ala
>WENV170002209
AGSF01000749
288544
Cyanobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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