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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170682383
LFIK01000043
360947
Alphaproteobacteria
TTT
Lys
>WENV170683216
LFIK01007130
280859
Alphaproteobacteria
TTT
Lys
>WENV170683364
LFIK01009884
280859
Alphaproteobacteria
TTT
Lys
>WENV170683481
LFIK01012888
210530
Alphaproteobacteria
CGG
Pro
>WENV170682473
LFIK01000165
375285
Alphaproteobacteria
TAC
Val
>WENV170683278
LFIK01008230
375285
Alphaproteobacteria
TAC
Val
>WENV170683185
LFIK01006274
201940
Alphaproteobacteria
CAT
Met
>WENV170682787
LFIK01001284
73490
Alphaproteobacteria
GAG
Leu
>WENV170683269
LFIK01007978
219129
Alphaproteobacteria
CCA
Trp
>WENV170682343
LFIK01000008
179768
Alphaproteobacteria
TGG
Pro
>WENV170682837
LFIK01001581
314617
Alphaproteobacteria
TAC
Val
>WENV170682484
LFIK01000189
36862
Alphaproteobacteria
CGA
Ser
>WENV170682616
LFIK01000540
36862
Alphaproteobacteria
CGA
Ser
>WENV170683014
LFIK01003467
36862
Alphaproteobacteria
CGA
Ser
>WENV170683648
LFIK01017817
36862
Alphaproteobacteria
CGA
Ser
>WENV170682789
LFIK01001306
399480
Alphaproteobacteria
GAA
Phe
>WENV170682813
LFIK01001440
399480
Alphaproteobacteria
GAA
Phe
>WENV170683093
LFIK01004708
399480
Alphaproteobacteria
GAA
Phe
>WENV170683506
LFIK01013929
493260
Alphaproteobacteria
GCA
Cys
>WENV170682577
LFIK01000425
400384
Alphaproteobacteria
TTC
Glu
>WENV170682605
LFIK01000497
400384
Alphaproteobacteria
TTC
Glu
>WENV170682685
LFIK01000893
400384
Alphaproteobacteria
TTC
Glu
>WENV170682773
LFIK01001151
400384
Alphaproteobacteria
TTC
Glu
>WENV170682920
LFIK01002703
400384
Alphaproteobacteria
TTC
Glu
>WENV170683272
LFIK01008037
400384
Alphaproteobacteria
TTC
Glu
>WENV170683016
LFIK01003468
78115
Alphaproteobacteria
GAG
Leu
>WENV170683073
LFIK01004440
78115
Alphaproteobacteria
GAG
Leu
>WENV170683568
LFIK01015680
78115
Alphaproteobacteria
GAG
Leu
>WENV170683084
LFIK01004563
340918
Alphaproteobacteria
CGT
Thr
>WENV170683142
LFIK01005379
340918
Alphaproteobacteria
CGT
Thr
>WENV170683513
LFIK01014219
340918
Alphaproteobacteria
CGT
Thr
>WENV170683570
LFIK01015898
32420
Alphaproteobacteria
CGA
Ser
>WENV170683289
LFIK01008274
179941
Alphaproteobacteria
CAT
Met
>WENV170682926
LFIK01002782
179941
Alphaproteobacteria
CAT
Met
>WENV170682923
LFIK01002757
179941
Alphaproteobacteria
CAT
Met
>WENV170682560
LFIK01000337
179941
Alphaproteobacteria
CAT
Met
>WENV170683294
LFIK01008403
485713
Alphaproteobacteria
CTG
Gln
>WENV170682558
LFIK01000326
141247
Alphaproteobacteria
CAA
Leu
>WENV170682987
LFIK01003087
320046
Alphaproteobacteria
CGT
Thr
>WENV170682815
LFIK01001451
210541
Alphaproteobacteria
CAT
Met
>WENV170683076
LFIK01004467
398999
Alphaproteobacteria
GGT
Thr
>WENV170682615
LFIK01000540
178503
Alphaproteobacteria
GGG
Pro
>WENV170682543
LFIK01000279
178503
Alphaproteobacteria
GGG
Pro
>WENV170683225
LFIK01007366
481326
Alphaproteobacteria
GCA
Cys
>WENV170682766
LFIK01001126
122480
Alphaproteobacteria
CAG
Leu
>WENV170682435
LFIK01000118
453762
Alphaproteobacteria
CAC
Val
>WENV170683146
LFIK01005412
176490
Alphaproteobacteria
CAT
Met
>WENV170683277
LFIK01008149
212319
Alphaproteobacteria
GTG
His
>WENV170683261
LFIK01007869
212319
Alphaproteobacteria
GTG
His
>WENV170682571
LFIK01000390
212319
Alphaproteobacteria
GTG
His
>WENV170682517
LFIK01000226
212319
Alphaproteobacteria
GTG
His
>WENV170682763
LFIK01001123
398994
Alphaproteobacteria
GTT
Asn
>WENV170682771
LFIK01001142
398994
Alphaproteobacteria
GTT
Asn
>WENV170682818
LFIK01001491
398994
Alphaproteobacteria
GTT
Asn
>WENV170682852
LFIK01001760
398994
Alphaproteobacteria
GTT
Asn
>WENV170683010
LFIK01003413
398994
Alphaproteobacteria
GTT
Asn
>WENV170682945
LFIK01002972
447674
Alphaproteobacteria
CAC
Val
>WENV170683210
LFIK01006871
447674
Alphaproteobacteria
CAC
Val
>WENV170683065
LFIK01004147
228484
Alphaproteobacteria
CCG
Arg
>WENV170682381
LFIK01000040
362323
Alphaproteobacteria
GAA
Phe
>WENV170682784
LFIK01001263
362323
Alphaproteobacteria
GAA
Phe
>WENV170683058
LFIK01004084
428327
Alphaproteobacteria
GCC
Gly
>WENV170682525
LFIK01000241
190609
Alphaproteobacteria
TCT
Arg
>WENV170682486
LFIK01000194
179993
Alphaproteobacteria
GTC
Asp
>WENV170683162
LFIK01005780
179993
Alphaproteobacteria
GTC
Asp
>WENV170682578
LFIK01000425
205112
Alphaproteobacteria
CCT
Arg
>WENV170682657
LFIK01000738
400693
Alphaproteobacteria
GCC
Gly
>WENV170682690
LFIK01000929
400693
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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