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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784409
MCHG01004983
400364
Bacillota
GTT
Asn
>WENV170784163
MCHG01000058
46866
Bacillota
TGA
Ser
>WENV170784420
MCHG01005473
296941
Bacillota
TGC
Ala
>WENV170784172
MCHG01000083
286187
Bacillota
TAC
Val
>WENV170784198
MCHG01000113
286187
Bacillota
TAC
Val
>WENV170784137
MCHG01000033
179661
Bacillota
CAT
Met
>WENV170784153
MCHG01000047
73480
Bacillota
CAG
Leu
>WENV170784146
MCHG01000041
280427
Bacillota
TAC
Val
>WENV170784116
MCHG01000018
280427
Bacillota
TAC
Val
>WENV170784087
MCHG01000009
280427
Bacillota
TAC
Val
>WENV170784111
MCHG01000017
400370
Bacillota
>WENV170784119
MCHG01000018
400370
Bacillota
>WENV170784184
MCHG01000089
179846
Bacillota
TTT
Lys
>WENV170784327
MCHG01000828
179846
Bacillota
TTT
Lys
>WENV170784328
MCHG01000828
200860
Bacillota
ACG
Arg
>WENV170784428
MCHG01006337
195133
Bacillota
GTC
Asp
>WENV170784265
MCHG01000297
178459
Bacillota
TCT
Arg
>WENV170784237
MCHG01000181
179849
Bacillota
GAC
Val
>WENV170784426
MCHG01006337
418607
Bacillota
TTC
Glu
>WENV170784345
MCHG01000977
398857
Bacillota
TTC
Glu
>WENV170784171
MCHG01000083
398857
Bacillota
TTC
Glu
>WENV170784341
MCHG01000966
398857
Bacillota
TTC
Glu
>WENV170784141
MCHG01000035
281076
Bacillota
CCA
Trp
>WENV170784249
MCHG01000231
400363
Bacillota
CGT
Thr
>WENV170784094
MCHG01000014
366312
Bacillota
TTC
Glu
>WENV170784321
MCHG01000828
366312
Bacillota
TTC
Glu
>WENV170784342
MCHG01000966
235661
Bacillota
GTC
Asp
>WENV170784329
MCHG01000828
284655
Bacillota
GGT
Thr
>WENV170784095
MCHG01000014
283209
Bacillota
GAA
Phe
>WENV170784234
MCHG01000181
283209
Bacillota
GAA
Phe
>WENV170784343
MCHG01000966
399260
Bacillota
TGT
Thr
>WENV170784347
MCHG01000977
399260
Bacillota
TGT
Thr
>WENV170784235
MCHG01000181
400371
Bacillota
GCA
Cys
>WENV170784189
MCHG01000102
289276
Bacillota
GTT
Asn
>WENV170784121
MCHG01000019
289276
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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