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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170949009
MEHZ011336838
208947
Alphaproteobacteria
CAT
Met
>WENV170951650
MEHZ011562840
291892
Alphaproteobacteria
TAC
Val
>WENV170952504
MEHZ011601103
291892
Alphaproteobacteria
TAC
Val
>WENV170948402
MEHZ011182856
29841
Alphaproteobacteria
GGA
Ser
>WENV170951631
MEHZ011561764
29841
Alphaproteobacteria
GGA
Ser
>WENV170948794
MEHZ011283105
140876
Alphaproteobacteria
>WENV170950806
MEHZ011518789
140876
Alphaproteobacteria
>WENV170950828
MEHZ011520489
179390
Alphaproteobacteria
TGG
Pro
>WENV170950920
MEHZ011527453
179390
Alphaproteobacteria
TGG
Pro
>WENV170951028
MEHZ011532449
179390
Alphaproteobacteria
TGG
Pro
>WENV170951165
MEHZ011539696
179390
Alphaproteobacteria
TGG
Pro
>WENV170952926
MEHZ011621059
179390
Alphaproteobacteria
TGG
Pro
>WENV170953868
MEHZ011667753
344449
Alphaproteobacteria
TGC
Ala
>WENV170948862
MEHZ011296350
201940
Alphaproteobacteria
CAT
Met
>WENV170949917
MEHZ011464479
191064
Alphaproteobacteria
CCG
Arg
>WENV170950575
MEHZ011504174
191064
Alphaproteobacteria
CCG
Arg
>WENV170953090
MEHZ011628320
191064
Alphaproteobacteria
CCG
Arg
>WENV170952949
MEHZ011622267
481268
Alphaproteobacteria
TCC
Gly
>WENV170949487
MEHZ011424619
314617
Alphaproteobacteria
TAC
Val
>WENV170949597
MEHZ011435284
314617
Alphaproteobacteria
TAC
Val
>WENV170949630
MEHZ011439093
314617
Alphaproteobacteria
TAC
Val
>WENV170952165
MEHZ011586677
281659
Alphaproteobacteria
TGC
Ala
>WENV170948120
MEHZ011088696
408543
Alphaproteobacteria
GAC
Val
>WENV170951243
MEHZ011544268
405688
Alphaproteobacteria
GTT
Asn
>WENV170953901
MEHZ011673292
216373
Alphaproteobacteria
TGG
Pro
>WENV170949131
MEHZ011364740
140892
Alphaproteobacteria
TAG
Leu
>WENV170947703
MEHZ010887414
436046
Alphaproteobacteria
GAC
Val
>WENV170948489
MEHZ011210868
398999
Alphaproteobacteria
GGT
Thr
>WENV170948878
MEHZ011301040
178503
Alphaproteobacteria
GGG
Pro
>WENV170950007
MEHZ011470274
178503
Alphaproteobacteria
GGG
Pro
>WENV170950259
MEHZ011487533
178503
Alphaproteobacteria
GGG
Pro
>WENV170951499
MEHZ011556625
178503
Alphaproteobacteria
GGG
Pro
>WENV170948677
MEHZ011257235
283510
Alphaproteobacteria
TTT
Lys
>WENV170950278
MEHZ011488068
281650
Alphaproteobacteria
CCA
Trp
>WENV170949846
MEHZ011457534
281650
Alphaproteobacteria
CCA
Trp
>WENV170949748
MEHZ011449514
281650
Alphaproteobacteria
CCA
Trp
>WENV170950690
MEHZ011511657
215287
Alphaproteobacteria
GGG
Pro
>WENV170949753
MEHZ011449918
215287
Alphaproteobacteria
GGG
Pro
>WENV170947670
MEHZ010855112
212319
Alphaproteobacteria
GTG
His
>WENV170947775
MEHZ010929434
178736
Alphaproteobacteria
CCT
Arg
>WENV170947736
MEHZ010908848
178736
Alphaproteobacteria
CCT
Arg
>WENV170948096
MEHZ011081516
398994
Alphaproteobacteria
GTT
Asn
>WENV170950069
MEHZ011474678
398994
Alphaproteobacteria
GTT
Asn
>WENV170950288
MEHZ011488500
398994
Alphaproteobacteria
GTT
Asn
>WENV170950988
MEHZ011530558
398994
Alphaproteobacteria
GTT
Asn
>WENV170951075
MEHZ011535473
398994
Alphaproteobacteria
GTT
Asn
>WENV170951591
MEHZ011560484
398994
Alphaproteobacteria
GTT
Asn
>WENV170952436
MEHZ011597641
398994
Alphaproteobacteria
GTT
Asn
>WENV170952589
MEHZ011605564
398994
Alphaproteobacteria
GTT
Asn
>WENV170953684
MEHZ011659141
329227
Alphaproteobacteria
TGC
Ala
>WENV170952998
MEHZ011624492
329227
Alphaproteobacteria
TGC
Ala
>WENV170952454
MEHZ011598407
329227
Alphaproteobacteria
TGC
Ala
>WENV170952257
MEHZ011590636
329227
Alphaproteobacteria
TGC
Ala
>WENV170950905
MEHZ011525726
329227
Alphaproteobacteria
TGC
Ala
>WENV170950650
MEHZ011507660
329227
Alphaproteobacteria
TGC
Ala
>WENV170950028
MEHZ011471573
329227
Alphaproteobacteria
TGC
Ala
>WENV170949950
MEHZ011466321
281676
Alphaproteobacteria
TAC
Val
>WENV170951738
MEHZ011567198
281676
Alphaproteobacteria
TAC
Val
>WENV170949563
MEHZ011431708
413432
Alphaproteobacteria
GGT
Thr
>WENV170952797
MEHZ011614916
413432
Alphaproteobacteria
GGT
Thr
>WENV170952428
MEHZ011597231
296763
Alphaproteobacteria
CCA
Trp
>WENV170953668
MEHZ011658385
296763
Alphaproteobacteria
CCA
Trp
>WENV170949887
MEHZ011462150
178784
Alphaproteobacteria
CAT
Met
>WENV170950647
MEHZ011507620
121990
Alphaproteobacteria
TAG
Leu
>WENV170950893
MEHZ011524823
121990
Alphaproteobacteria
TAG
Leu
>WENV170950861
MEHZ011522164
428327
Alphaproteobacteria
GCC
Gly
>WENV170949460
MEHZ011421202
404182
Alphaproteobacteria
CAC
Val
>WENV170948441
MEHZ011194521
398996
Alphaproteobacteria
GCC
Gly
>WENV170948785
MEHZ011279973
338616
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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