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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180232213
OBCO01000195
485753
Bacillota
GGT
Thr
>WENV180232081
OBCO01000094
280903
Bacillota
>WENV180231762
OBCO01000003
176548
Bacillota
CAT
Met
>WENV180232120
OBCO01000122
281299
Bacillota
TTT
Lys
>WENV180232308
OBCO01000296
281299
Bacillota
TTT
Lys
>WENV180232516
OBCO01000704
281299
Bacillota
TTT
Lys
>WENV180232537
OBCO01000761
281299
Bacillota
TTT
Lys
>WENV180232059
OBCO01000080
118683
Bacillota
GTA
Tyr
>WENV180232667
OBCO01003737
280870
Bacillota
TGC
Ala
>WENV180231747
OBCO01000003
280901
Bacillota
GTT
Asn
>WENV180231771
OBCO01000003
280901
Bacillota
GTT
Asn
>WENV180232080
OBCO01000094
280901
Bacillota
GTT
Asn
>WENV180232301
OBCO01000296
480520
Bacillota
TCC
Gly
>WENV180232116
OBCO01000122
480520
Bacillota
TCC
Gly
>WENV180232311
OBCO01000296
480520
Bacillota
TCC
Gly
>WENV180232304
OBCO01000296
480520
Bacillota
TCC
Gly
>WENV180232173
OBCO01000163
398936
Bacillota
CCT
Arg
>WENV180232347
OBCO01000317
29462
Bacillota
GGA
Ser
>WENV180232441
OBCO01000443
281307
Bacillota
GGT
Thr
>WENV180232119
OBCO01000122
399274
Bacillota
TTG
Gln
>WENV180232307
OBCO01000296
399274
Bacillota
TTG
Gln
>WENV180232515
OBCO01000704
399274
Bacillota
TTG
Gln
>WENV180232117
OBCO01000122
176679
Bacillota
TCT
Arg
>WENV180232302
OBCO01000296
176679
Bacillota
TCT
Arg
>WENV180232305
OBCO01000296
176679
Bacillota
TCT
Arg
>WENV180231938
OBCO01000039
401881
Bacillota
CCT
Arg
>WENV180232219
OBCO01000205
399058
Bacillota
CCT
Arg
>WENV180232471
OBCO01000540
176678
Bacillota
GTC
Asp
>WENV180232670
OBCO01003795
176678
Bacillota
GTC
Asp
>WENV180232482
OBCO01000555
307633
Bacillota
CAT
Met
>WENV180232664
OBCO01002440
398935
Bacillota
>WENV180232051
OBCO01000073
56156
Bacillota
>WENV180231764
OBCO01000003
8513
Bacillota
TGA
Ser
>WENV180232250
OBCO01000229
46658
Bacillota
AAG
Leu
>WENV180232266
OBCO01000259
46658
Bacillota
AAG
Leu
>WENV180232150
OBCO01000148
100513
Bacillota
CAG
Leu
>WENV180232187
OBCO01000172
400140
Bacillota
TTC
Glu
>WENV180232248
OBCO01000229
179563
Bacillota
GAT
Ile
>WENV180232274
OBCO01000269
20257
Bacillota
>WENV180232217
OBCO01000199
46686
Bacillota
TAA
Leu
>WENV180232481
OBCO01000555
46686
Bacillota
TAA
Leu
>WENV180232346
OBCO01000317
399271
Bacillota
CCT
Arg
>WENV180232066
OBCO01000084
47119
Bacillota
TAA
Leu
>WENV180231963
OBCO01000045
280902
Bacillota
GAC
Val
>WENV180231809
OBCO01000008
180908
Bacillota
CGG
Pro
>WENV180232191
OBCO01000174
399269
Bacillota
CTC
Glu
>WENV180232448
OBCO01000469
487804
Bacillota
GGT
Thr
>WENV180232147
OBCO01000142
73130
Bacillota
CAA
Leu
>WENV180231767
OBCO01000003
280900
Bacillota
GAA
Phe
>WENV180231790
OBCO01000006
280900
Bacillota
GAA
Phe
>WENV180231796
OBCO01000006
491377
Bacillota
GCA
Cys
>WENV180231768
OBCO01000003
316804
Bacillota
GTG
His
>WENV180232118
OBCO01000122
330433
Bacillota
GTG
His
>WENV180232306
OBCO01000296
330433
Bacillota
GTG
His
>WENV180232514
OBCO01000704
330433
Bacillota
GTG
His
>WENV180232319
OBCO01000303
188356
Bacillota
CAT
Met
>WENV180232067
OBCO01000084
179130
Bacillota
ACG
Arg
>WENV180231800
OBCO01000006
176252
Bacillota
CGT
Thr
>WENV180231758
OBCO01000003
46665
Bacillota
TAA
Leu
>WENV180232168
OBCO01000158
399273
Bacillota
CCC
Gly
>WENV180231948
OBCO01000040
399041
Bacillota
CCA
Trp
>WENV180231947
OBCO01000040
399041
Bacillota
CCA
Trp
>WENV180232216
OBCO01000199
400839
Bacillota
ACG
Arg
>WENV180232105
OBCO01000114
176046
Bacillota
GTT
Asn
>WENV180231811
OBCO01000008
332864
Bacillota
CTT
Lys
>WENV180231812
OBCO01000008
332864
Bacillota
CTT
Lys
>WENV180231772
OBCO01000003
20242
Bacillota
GCT
Ser
>WENV180232666
OBCO01003737
176562
Bacillota
CAT
Met
>WENV180232159
OBCO01000155
281300
Bacillota
GAA
Phe
>WENV180232439
OBCO01000443
281300
Bacillota
GAA
Phe
>WENV180232470
OBCO01000540
281300
Bacillota
GAA
Phe
>WENV180231748
OBCO01000003
20285
Bacillota
GCT
Ser
>WENV180232440
OBCO01000443
399272
Bacillota
GCA
Cys
>WENV180232124
OBCO01000125
398934
Bacillota
CCG
Arg
>WENV180232661
OBCO01002259
175868
Bacillota
GTT
Asn
>WENV180232452
OBCO01000469
119278
Bacillota
TAG
Leu
>WENV180231944
OBCO01000040
335164
Bacillota
TAC
Val
>WENV180232669
OBCO01003795
335164
Bacillota
TAC
Val
>WENV180232312
OBCO01000296
176681
Bacillota
TCG
Arg
>WENV180232151
OBCO01000148
13468
Bacillota
CGA
Ser
>WENV180231943
OBCO01000040
117890
Bacillota
GTA
Tyr
>WENV180231946
OBCO01000040
117890
Bacillota
GTA
Tyr
>WENV180231751
OBCO01000003
480424
Bacillota
TCC
Gly
>WENV180231769
OBCO01000003
480424
Bacillota
TCC
Gly
>WENV180232215
OBCO01000199
20276
Bacillota
GCT
Ser
>WENV180232694
OBCO01009058
20276
Bacillota
GCT
Ser
>WENV180232309
OBCO01000296
117892
Bacillota
TAG
Leu
>WENV180231798
OBCO01000006
73066
Bacillota
GAG
Leu
>WENV180232142
OBCO01000136
288974
Bacillota
CTT
Lys
>WENV180231785
OBCO01000006
13236
Bacillota
GGA
Ser
>WENV180232167
OBCO01000158
117891
Bacillota
TAG
Leu
>WENV180231791
OBCO01000006
140790
Bacillota
GTA
Tyr
>WENV180231801
OBCO01000006
140790
Bacillota
GTA
Tyr
>WENV180232685
OBCO01008607
281306
Bacillota
TGC
Ala
>WENV180232549
OBCO01000808
20275
Bacillota
TGA
Ser
>WENV180232693
OBCO01009047
20275
Bacillota
TGA
Ser
>WENV180232310
OBCO01000296
399275
Bacillota
GCC
Gly
>WENV180232542
OBCO01000780
223045
Bacillota
GAT
Ile
>WENV180232508
OBCO01000675
127792
Bacillota
TAG
Leu
>WENV180231759
OBCO01000003
176250
Bacillota
ACG
Arg
>WENV180231793
OBCO01000006
280895
Bacillota
GTG
His
>WENV180232004
OBCO01000054
99922
Bacillota
GAG
Leu
>WENV180232607
OBCO01001077
320075
Bacillota
GAA
Phe
>WENV180232690
OBCO01008687
8724
Bacillota
GCT
Ser
>WENV180232679
OBCO01008447
398852
Bacillota
CTC
Glu
>WENV180231945
OBCO01000040
399260
Bacillota
TGT
Thr
>WENV180232472
OBCO01000540
399260
Bacillota
TGT
Thr
>WENV180232686
OBCO01008664
399260
Bacillota
TGT
Thr
>WENV180232543
OBCO01000780
329074
Bacillota
TGC
Ala
>WENV180232152
OBCO01000148
29586
Bacillota
GGA
Ser
>WENV180232473
OBCO01000540
399261
Bacillota
>WENV180232668
OBCO01003795
399261
Bacillota
>WENV180231854
OBCO01000016
8514
Bacillota
CGA
Ser
>WENV180231763
OBCO01000003
176319
Bacillota
CAT
Met
>WENV180231795
OBCO01000006
399057
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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