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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180291802
OBIV01181059
77010
Alphaproteobacteria
GAG
Leu
>WENV180291262
OBIV01027095
193373
Alphaproteobacteria
CGG
Pro
>WENV180292723
OBIV01594662
482100
Alphaproteobacteria
TCC
Gly
>WENV180292748
OBIV01604476
6092
Alphaproteobacteria
GCT
Ser
>WENV180291290
OBIV01032619
193088
Alphaproteobacteria
GAT
Ile
>WENV180292352
OBIV01405676
308662
Alphaproteobacteria
GAA
Phe
>WENV180291952
OBIV01242238
282748
Alphaproteobacteria
CGT
Thr
>WENV180292505
OBIV01474349
408543
Alphaproteobacteria
GAC
Val
>WENV180291291
OBIV01032619
307179
Alphaproteobacteria
TGC
Ala
>WENV180292900
OBIV01701206
184517
Alphaproteobacteria
GGG
Pro
>WENV180292580
OBIV01519375
178337
Alphaproteobacteria
GTG
His
>WENV180291221
OBIV01021066
179883
Alphaproteobacteria
CCA
Trp
>WENV180292788
OBIV01624045
183628
Alphaproteobacteria
CCG
Arg
>WENV180292604
OBIV01532308
9363
Alphaproteobacteria
GCT
Ser
>WENV180292668
OBIV01561945
176232
Alphaproteobacteria
TCT
Arg
>WENV180292650
OBIV01555591
201760
Alphaproteobacteria
GAT
Ile
>WENV180292228
OBIV01358822
290520
Alphaproteobacteria
TAC
Val
>WENV180292295
OBIV01385861
307097
Alphaproteobacteria
CGC
Ala
>WENV180291519
OBIV01074482
480900
Alphaproteobacteria
GCA
Cys
>WENV180292931
OBIV01716527
118145
Alphaproteobacteria
TAG
Leu
>WENV180291571
OBIV01085112
179638
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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