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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182562315
OJDZ01000757
21965
Gammaproteobacteria
TGA
Ser
>WENV182562293
OJDZ01000548
180052
Gammaproteobacteria
CCT
Arg
>WENV182562385
OJDZ01001854
281440
Gammaproteobacteria
TGT
Thr
>WENV182562234
OJDZ01000164
183804
Gammaproteobacteria
CAT
Met
>WENV182562468
OJDZ01003807
183804
Gammaproteobacteria
CAT
Met
>WENV182562441
OJDZ01003151
21535
Gammaproteobacteria
GCT
Ser
>WENV182562462
OJDZ01003746
21535
Gammaproteobacteria
GCT
Ser
>WENV182562352
OJDZ01001206
180719
Gammaproteobacteria
ACG
Arg
>WENV182562270
OJDZ01000375
283221
Gammaproteobacteria
GCC
Gly
>WENV182562307
OJDZ01000636
117915
Gammaproteobacteria
TAG
Leu
>WENV182562494
OJDZ01004855
328691
Gammaproteobacteria
GGT
Thr
>WENV182562461
OJDZ01003738
176796
Gammaproteobacteria
GGG
Pro
>WENV182562370
OJDZ01001471
176796
Gammaproteobacteria
GGG
Pro
>WENV182562460
OJDZ01003698
281437
Gammaproteobacteria
CCA
Trp
>WENV182562291
OJDZ01000506
178469
Gammaproteobacteria
CAT
Met
>WENV182562508
OJDZ01005751
302240
Gammaproteobacteria
GGC
Ala
>WENV182562374
OJDZ01001534
399352
Gammaproteobacteria
GCC
Gly
>WENV182562219
OJDZ01000118
330614
Gammaproteobacteria
TTT
Lys
>WENV182562249
OJDZ01000254
330614
Gammaproteobacteria
TTT
Lys
>WENV182562266
OJDZ01000350
180053
Gammaproteobacteria
CAT
Met
>WENV182562380
OJDZ01001675
73863
Gammaproteobacteria
CAG
Leu
>WENV182562395
OJDZ01001959
20407
Gammaproteobacteria
TGA
Ser
>WENV182562549
OJDZ01009715
284397
Gammaproteobacteria
GAA
Phe
>WENV182562281
OJDZ01000423
178472
Gammaproteobacteria
CAT
Met
>WENV182562362
OJDZ01001424
283223
Gammaproteobacteria
TTT
Lys
>WENV182562623
OJDZ01023962
399250
Gammaproteobacteria
TCC
Gly
>WENV182562409
OJDZ01002356
140925
Gammaproteobacteria
GTA
Tyr
>WENV182562482
OJDZ01003987
176795
Gammaproteobacteria
CAT
Met
>WENV182562481
OJDZ01003923
180717
Gammaproteobacteria
CCA
Trp
>WENV182562416
OJDZ01002571
180717
Gammaproteobacteria
CCA
Trp
>WENV182562377
OJDZ01001616
180717
Gammaproteobacteria
CCA
Trp
>WENV182562230
OJDZ01000148
180717
Gammaproteobacteria
CCA
Trp
>WENV182562326
OJDZ01000897
178006
Gammaproteobacteria
GGG
Pro
>WENV182562255
OJDZ01000267
178006
Gammaproteobacteria
GGG
Pro
>WENV182562339
OJDZ01000986
178471
Gammaproteobacteria
GTT
Asn
>WENV182562340
OJDZ01000986
178471
Gammaproteobacteria
GTT
Asn
>WENV182562283
OJDZ01000423
441770
Gammaproteobacteria
TTG
Gln
>WENV182562306
OJDZ01000611
176790
Gammaproteobacteria
ACG
Arg
>WENV182562231
OJDZ01000152
351236
Gammaproteobacteria
TTT
Lys
>WENV182562271
OJDZ01000375
481023
Gammaproteobacteria
GCA
Cys
>WENV182562559
OJDZ01010752
292006
Gammaproteobacteria
TGC
Ala
>WENV182562276
OJDZ01000396
181513
Gammaproteobacteria
TGG
Pro
>WENV182562259
OJDZ01000299
181513
Gammaproteobacteria
TGG
Pro
>WENV182562221
OJDZ01000118
181513
Gammaproteobacteria
TGG
Pro
>WENV182562157
OJDZ01000004
181513
Gammaproteobacteria
TGG
Pro
>WENV182562321
OJDZ01000825
281432
Gammaproteobacteria
TTG
Gln
>WENV182562573
OJDZ01012524
243308
Gammaproteobacteria
TGG
Pro
>WENV182562158
OJDZ01000005
182472
Gammaproteobacteria
GTC
Asp
>WENV182562159
OJDZ01000005
182472
Gammaproteobacteria
GTC
Asp
>WENV182562285
OJDZ01000431
76195
Gammaproteobacteria
CAA
Leu
>WENV182562448
OJDZ01003305
178473
Gammaproteobacteria
TGG
Pro
>WENV182562389
OJDZ01001871
178466
Gammaproteobacteria
CCA
Trp
>WENV182562245
OJDZ01000226
280812
Gammaproteobacteria
GAA
Phe
>WENV182562218
OJDZ01000113
92638
Gammaproteobacteria
TAA
Leu
>WENV182562282
OJDZ01000423
118206
Gammaproteobacteria
TAG
Leu
>WENV182562555
OJDZ01010289
281436
Gammaproteobacteria
TGC
Ala
>WENV182562346
OJDZ01001194
176791
Gammaproteobacteria
TGG
Pro
>WENV182562215
OJDZ01000091
176545
Gammaproteobacteria
CAT
Met
>WENV182562405
OJDZ01002261
118204
Gammaproteobacteria
CAA
Leu
>WENV182562305
OJDZ01000611
30083
Gammaproteobacteria
GCT
Ser
>WENV182562309
OJDZ01000667
180998
Gammaproteobacteria
GAC
Val
>WENV182562354
OJDZ01001220
180998
Gammaproteobacteria
GAC
Val
>WENV182562294
OJDZ01000557
176798
Gammaproteobacteria
CAT
Met
>WENV182562404
OJDZ01002209
401684
Gammaproteobacteria
CCT
Arg
>WENV182562452
OJDZ01003557
401684
Gammaproteobacteria
CCT
Arg
>WENV182562422
OJDZ01002686
178169
Gammaproteobacteria
GAC
Val
>WENV182562397
OJDZ01002007
178169
Gammaproteobacteria
GAC
Val
>WENV182562166
OJDZ01000016
178169
Gammaproteobacteria
GAC
Val
>WENV182562509
OJDZ01005751
283226
Gammaproteobacteria
TAC
Val
>WENV182562272
OJDZ01000375
73481
Gammaproteobacteria
TAA
Leu
>WENV182562348
OJDZ01001194
281433
Gammaproteobacteria
GTG
His
>WENV182562430
OJDZ01002937
180718
Gammaproteobacteria
CAT
Met
>WENV182562289
OJDZ01000476
74048
Gammaproteobacteria
CAA
Leu
>WENV182562368
OJDZ01001456
178467
Gammaproteobacteria
GGG
Pro
>WENV182562265
OJDZ01000336
334421
Gammaproteobacteria
TGT
Thr
>WENV182562247
OJDZ01000236
346373
Gammaproteobacteria
GAA
Phe
>WENV182562323
OJDZ01000853
400373
Gammaproteobacteria
CCG
Arg
>WENV182562391
OJDZ01001935
283225
Gammaproteobacteria
TGT
Thr
>WENV182562367
OJDZ01001452
282683
Gammaproteobacteria
GGC
Ala
>WENV182562229
OJDZ01000147
362004
Gammaproteobacteria
TGT
Thr
>WENV182562359
OJDZ01001352
362004
Gammaproteobacteria
TGT
Thr
>WENV182562491
OJDZ01004855
362004
Gammaproteobacteria
TGT
Thr
>WENV182562363
OJDZ01001424
29695
Gammaproteobacteria
GGA
Ser
>WENV182562302
OJDZ01000590
176797
Gammaproteobacteria
CCG
Arg
>WENV182562312
OJDZ01000706
180680
Gammaproteobacteria
GAC
Val
>WENV182562175
OJDZ01000026
180680
Gammaproteobacteria
GAC
Val
>WENV182562172
OJDZ01000018
56623
Gammaproteobacteria
GGA
Ser
>WENV182562613
OJDZ01021610
180678
Gammaproteobacteria
CCG
Arg
>WENV182562375
OJDZ01001584
402799
Gammaproteobacteria
TTG
Gln
>WENV182562407
OJDZ01002297
362336
Gammaproteobacteria
TTT
Lys
>WENV182562290
OJDZ01000498
281434
Gammaproteobacteria
GTT
Asn
>WENV182562314
OJDZ01000757
281434
Gammaproteobacteria
GTT
Asn
>WENV182562351
OJDZ01001206
13469
Gammaproteobacteria
GCT
Ser
>WENV182562313
OJDZ01000756
8605
Gammaproteobacteria
>WENV182562347
OJDZ01001194
176792
Gammaproteobacteria
TCT
Arg
>WENV182562246
OJDZ01000232
285547
Gammaproteobacteria
TTG
Gln
>WENV182562531
OJDZ01007422
178475
Gammaproteobacteria
GAC
Val
>WENV182562392
OJDZ01001935
283224
Gammaproteobacteria
GAA
Phe
>WENV182562280
OJDZ01000410
180681
Gammaproteobacteria
TGG
Pro
>WENV182562214
OJDZ01000089
180681
Gammaproteobacteria
TGG
Pro
>WENV182562210
OJDZ01000089
180681
Gammaproteobacteria
TGG
Pro
>WENV182562401
OJDZ01002116
400372
Gammaproteobacteria
CCT
Arg
>WENV182562325
OJDZ01000877
20287
Gammaproteobacteria
GGA
Ser
>WENV182562274
OJDZ01000392
14091
Gammaproteobacteria
TGA
Ser
>WENV182562273
OJDZ01000392
14091
Gammaproteobacteria
TGA
Ser
>WENV182562275
OJDZ01000392
14091
Gammaproteobacteria
TGA
Ser
>WENV182562156
OJDZ01000004
296680
Gammaproteobacteria
GTT
Asn
>WENV182562167
OJDZ01000016
296680
Gammaproteobacteria
GTT
Asn
>WENV182562211
OJDZ01000089
184424
Gammaproteobacteria
TCT
Arg
>WENV182562228
OJDZ01000147
285954
Gammaproteobacteria
GAA
Phe
>WENV182562413
OJDZ01002453
285954
Gammaproteobacteria
GAA
Phe
>WENV182562328
OJDZ01000904
285954
Gammaproteobacteria
GAA
Phe
>WENV182562420
OJDZ01002651
118205
Gammaproteobacteria
GTA
Tyr
>WENV182562241
OJDZ01000176
76206
Gammaproteobacteria
TAA
Leu
>WENV182562512
OJDZ01005816
141076
Gammaproteobacteria
GTA
Tyr
>WENV182562180
OJDZ01000040
141076
Gammaproteobacteria
GTA
Tyr
>WENV182562542
OJDZ01008383
480549
Gammaproteobacteria
TCC
Gly
>WENV182562499
OJDZ01005102
56726
Gammaproteobacteria
GGA
Ser
>WENV182562489
OJDZ01004398
56726
Gammaproteobacteria
GGA
Ser
>WENV182562383
OJDZ01001774
190582
Gammaproteobacteria
CAT
Met
>WENV182562333
OJDZ01000944
74110
Gammaproteobacteria
CAA
Leu
>WENV182562191
OJDZ01000048
180679
Gammaproteobacteria
CCA
Trp
>WENV182562227
OJDZ01000132
180679
Gammaproteobacteria
CCA
Trp
>WENV182562292
OJDZ01000518
180679
Gammaproteobacteria
CCA
Trp
>WENV182562311
OJDZ01000681
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK