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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183731646
PJTT01000075
480996
Bacteroidota
CCA
Trp
>WENV183731853
PJTT01000270
480996
Bacteroidota
CCA
Trp
>WENV183731608
PJTT01000057
176607
Bacteroidota
CAT
Met
>WENV183731720
PJTT01000120
344503
Bacteroidota
TTT
Lys
>WENV183731721
PJTT01000120
344503
Bacteroidota
TTT
Lys
>WENV183731723
PJTT01000120
344503
Bacteroidota
TTT
Lys
>WENV183731799
PJTT01000191
155775
Bacteroidota
TAC
Val
>WENV183731645
PJTT01000075
405962
Bacteroidota
GGT
Thr
>WENV183731548
PJTT01000019
182483
Bacteroidota
GTG
His
>WENV183731550
PJTT01000019
156756
Bacteroidota
TGG
Pro
>WENV183731501
PJTT01000011
192263
Bacteroidota
CAT
Met
>WENV183731602
PJTT01000053
192263
Bacteroidota
CAT
Met
>WENV183731642
PJTT01000075
191942
Bacteroidota
TCG
Arg
>WENV183731861
PJTT01000275
195531
Bacteroidota
GTC
Asp
>WENV183731805
PJTT01000196
195531
Bacteroidota
GTC
Asp
>WENV183731743
PJTT01000137
200370
Bacteroidota
CAT
Met
>WENV183731454
PJTT01000004
287318
Bacteroidota
GAA
Phe
>WENV183731697
PJTT01000108
287318
Bacteroidota
GAA
Phe
>WENV183731644
PJTT01000075
140923
Bacteroidota
GTA
Tyr
>WENV183731812
PJTT01000202
140923
Bacteroidota
GTA
Tyr
>WENV183731549
PJTT01000019
74253
Bacteroidota
GCT
Ser
>WENV183731695
PJTT01000106
177083
Bacteroidota
TGT
Thr
>WENV183731694
PJTT01000106
177083
Bacteroidota
TGT
Thr
>WENV183731643
PJTT01000075
177083
Bacteroidota
TGT
Thr
>WENV183731749
PJTT01000148
179905
Bacteroidota
GTT
Asn
>WENV183731704
PJTT01000114
179905
Bacteroidota
GTT
Asn
>WENV183731639
PJTT01000075
336000
Bacteroidota
CAT
Met
>WENV183731641
PJTT01000075
336000
Bacteroidota
CAT
Met
>WENV183731629
PJTT01000069
304112
Bacteroidota
GAA
Phe
>WENV183731502
PJTT01000011
304112
Bacteroidota
GAA
Phe
>WENV183731788
PJTT01000182
179914
Bacteroidota
GGG
Pro
>WENV183731700
PJTT01000111
284228
Bacteroidota
CAT
Met
>WENV183731803
PJTT01000194
283107
Bacteroidota
GCC
Gly
>WENV183731512
PJTT01000013
281213
Bacteroidota
TGT
Thr
>WENV183731685
PJTT01000100
337835
Bacteroidota
GCC
Gly
>WENV183731429
PJTT01000001
337835
Bacteroidota
GCC
Gly
>WENV183731515
PJTT01000013
403862
Bacteroidota
GGT
Thr
>WENV183731701
PJTT01000111
281193
Bacteroidota
CAT
Met
>WENV183731702
PJTT01000111
281193
Bacteroidota
CAT
Met
>WENV183731424
PJTT01000001
481284
Bacteroidota
CCA
Trp
>WENV183731673
PJTT01000095
179374
Bacteroidota
TGG
Pro
>WENV183731674
PJTT01000095
179374
Bacteroidota
TGG
Pro
>WENV183731852
PJTT01000269
179374
Bacteroidota
TGG
Pro
>WENV183731753
PJTT01000155
480500
Bacteroidota
GCA
Cys
>WENV183731796
PJTT01000188
485115
Bacteroidota
TTG
Gln
>WENV183731797
PJTT01000188
485115
Bacteroidota
TTG
Gln
>WENV183731516
PJTT01000013
481263
Bacteroidota
CCA
Trp
>WENV183731640
PJTT01000075
409459
Bacteroidota
TTC
Glu
>WENV183731665
PJTT01000087
409459
Bacteroidota
TTC
Glu
>WENV183731666
PJTT01000087
409459
Bacteroidota
TTC
Glu
>WENV183731800
PJTT01000191
161383
Bacteroidota
TAC
Val
>WENV183731455
PJTT01000004
46780
Bacteroidota
TAA
Leu
>WENV183731601
PJTT01000053
198027
Bacteroidota
GGC
Ala
>WENV183731603
PJTT01000055
64185
Bacteroidota
TGA
Ser
>WENV183731585
PJTT01000036
281207
Bacteroidota
GAA
Phe
>WENV183731586
PJTT01000036
281207
Bacteroidota
GAA
Phe
>WENV183731587
PJTT01000036
281207
Bacteroidota
GAA
Phe
>WENV183731698
PJTT01000108
119078
Bacteroidota
TAG
Leu
>WENV183731820
PJTT01000215
60989
Bacteroidota
TAA
Leu
>WENV183731551
PJTT01000019
184112
Bacteroidota
TCT
Arg
>WENV183731574
PJTT01000030
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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