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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183740516
PJUF01003002
239991
Betaproteobacteria
TGG
Pro
>WENV183740274
PJUF01000946
300982
Betaproteobacteria
TTT
Lys
>WENV183740526
PJUF01003127
212101
Betaproteobacteria
GAT
Ile
>WENV183740398
PJUF01001626
283193
Betaproteobacteria
CCA
Trp
>WENV183740760
PJUF01009226
371259
Betaproteobacteria
TAC
Val
>WENV183740584
PJUF01003834
305239
Betaproteobacteria
TTT
Lys
>WENV183741343
PJUF01091972
305239
Betaproteobacteria
TTT
Lys
>WENV183741085
PJUF01038626
283190
Betaproteobacteria
CGT
Thr
>WENV183741209
PJUF01056765
283190
Betaproteobacteria
CGT
Thr
>WENV183740164
PJUF01000554
464758
Betaproteobacteria
GGT
Thr
>WENV183740413
PJUF01001740
464758
Betaproteobacteria
GGT
Thr
>WENV183740633
PJUF01004933
464758
Betaproteobacteria
GGT
Thr
>WENV183741088
PJUF01039113
301701
Betaproteobacteria
GTG
His
>WENV183741098
PJUF01040850
73476
Betaproteobacteria
GTA
Tyr
>WENV183740427
PJUF01002019
178141
Betaproteobacteria
CAT
Met
>WENV183740428
PJUF01002019
178141
Betaproteobacteria
CAT
Met
>WENV183741143
PJUF01046484
381006
Betaproteobacteria
GTT
Asn
>WENV183740530
PJUF01003135
300516
Betaproteobacteria
TTT
Lys
>WENV183740443
PJUF01002222
300516
Betaproteobacteria
TTT
Lys
>WENV183740349
PJUF01001309
300516
Betaproteobacteria
TTT
Lys
>WENV183741226
PJUF01060611
117923
Betaproteobacteria
CAG
Leu
>WENV183740534
PJUF01003176
29693
Betaproteobacteria
TGA
Ser
>WENV183740975
PJUF01023348
180897
Betaproteobacteria
TCT
Arg
>WENV183740735
PJUF01007997
401202
Betaproteobacteria
CCT
Arg
>WENV183741016
PJUF01028153
401202
Betaproteobacteria
CCT
Arg
>WENV183741133
PJUF01044941
284214
Betaproteobacteria
TAC
Val
>WENV183740615
PJUF01004516
117806
Betaproteobacteria
GTA
Tyr
>WENV183740493
PJUF01002706
194596
Betaproteobacteria
TCT
Arg
>WENV183741266
PJUF01071079
178430
Betaproteobacteria
TTG
Gln
>WENV183740982
PJUF01023829
178430
Betaproteobacteria
TTG
Gln
>WENV183740833
PJUF01012431
178217
Betaproteobacteria
TTG
Gln
>WENV183740345
PJUF01001279
23222
Betaproteobacteria
CGA
Ser
>WENV183740873
PJUF01014332
23222
Betaproteobacteria
CGA
Ser
>WENV183741206
PJUF01056428
281681
Betaproteobacteria
TTT
Lys
>WENV183741247
PJUF01065683
118059
Betaproteobacteria
TAG
Leu
>WENV183741195
PJUF01054146
118059
Betaproteobacteria
TAG
Leu
>WENV183741191
PJUF01053178
118059
Betaproteobacteria
TAG
Leu
>WENV183741217
PJUF01058806
400347
Betaproteobacteria
CAC
Val
>WENV183740631
PJUF01004750
177009
Betaproteobacteria
GGG
Pro
>WENV183740307
PJUF01001077
178227
Betaproteobacteria
TCT
Arg
>WENV183741211
PJUF01057821
135014
Betaproteobacteria
GAG
Leu
>WENV183741124
PJUF01043505
178096
Betaproteobacteria
TCT
Arg
>WENV183740616
PJUF01004516
283554
Betaproteobacteria
TCC
Gly
>WENV183741128
PJUF01044092
29692
Betaproteobacteria
CGA
Ser
>WENV183741185
PJUF01052626
481018
Betaproteobacteria
GCA
Cys
>WENV183741321
PJUF01085105
118195
Betaproteobacteria
GAG
Leu
>WENV183741197
PJUF01054533
8602
Betaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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