tRNA genes clustered and arranged according to each identical group

Acidithiobacillia

Anticodon = TCT

HIT: 11 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.180449 (24 seq.)
>W1710805087 LJZS01000012 Gammaproteobacteria Halomonas sp. HL-48 [LJZS] 81890 81814 - Arg TCT [ENA] ¡û
>W1711220209 LXQG01000102 Acidithiobacillia Acidithiobacillus caldus [LXQG] 2268 2192 - Arg TCT [ENA] ¡û
>W1711292969 LZYE01000197 Acidithiobacillia Acidithiobacillus caldus [LZYE] 26446 26370 - Arg TCT [ENA] ¡û
>W1711293012 LZYF01000156 Acidithiobacillia Acidithiobacillus caldus [LZYF] 12474 12550 + Arg TCT [ENA] ¡û
>W1711293055 LZYG01000157 Acidithiobacillia Acidithiobacillus caldus [LZYG] 12108 12184 + Arg TCT [ENA] ¡û
>W1711293110 LZYH01000817 Acidithiobacillia Acidithiobacillus caldus [LZYH] 671 595 - Arg TCT [ENA] ¡û
>WENV181233829 OFET01000129 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 24047 24123 + Arg TCT [ENA] ¢þ
>WENV181406241 OGCG01000045 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 33963 34039 + Arg TCT [ENA] ¢þ
>C181130811 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 1816611 1816687 + Arg TCT - ¡û
>W141703422 JMMC01000007 Gammaproteobacteria Halomonas sp. HL-48 [JMMC] 24068 24144 + Arg TCT [ENA] ¡û
>W09134925 ACVD01000116 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [ACVD] 11521 11597 + Arg TCT [ENA] ¡û
>W1910339593 FTLE01000003 Gammaproteobacteria Halomonas massiliensis Marseille-P2426 [FTLE] 139025 139101 + Arg TCT [ENA] ¡û
>W1911539891 ONZI01000004 Gammaproteobacteria Kushneria phyllosphaerae EAod3 [ONZI] 70113 70189 + Arg TCT [ENA] ¡û
>W1810200045 PNRG01000009 Gammaproteobacteria Halomonas urumqiensis BZ-SZ-XJ27 [PNRG] 13322 13398 + Arg TCT [ENA] ¡û
>W1810758273 QPIJ01000003 Gammaproteobacteria Halomonas rituensis TQ8S [QPIJ] 109602 109526 - Arg TCT [ENA] ¡û
>W1810786973 QRDJ01000006 Gammaproteobacteria Kushneria indalinina DSM 14324 [QRDJ] 863873 863949 + Arg TCT [ENA] ¡û
>C151007950 CP005986 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [CP005986] 1698311 1698387 + Arg TCT [Ensembl] ¡û
>W1510071611 CDGR01000150 Gammaproteobacteria Halomonas salina B6 [CDGR] 24823 24747 - Arg TCT [ENA] ¡û
>C11100494 CP002573 Acidithiobacillia Acidithiobacillus caldus SM-1 [CP002573] 1891530 1891606 + Arg TCT [Ensembl] ¡û
>W1511319693 JPZL01000001 Gammaproteobacteria Halomonas xinjiangensis TRM 0175 [JPZL] 260030 259954 - Arg TCT [ENA] ¡û
>W1610668944 LJZS01000012 Gammaproteobacteria Halomonas sp. HL-48 [LJZS] 81890 81814 - Arg TCT [ENA] ¡û
>W1611004681 LXQG01000102 Acidithiobacillia Acidithiobacillus caldus [LXQG] 2268 2192 - Arg TCT [ENA] ¡û
>W1710519423 FNES01000008 Gammaproteobacteria Halomonas gudaonensis [FNES] 111791 111715 - Arg TCT [ENA] ¡û
>W1710544891 FOBC01000028 Gammaproteobacteria Halomonas daqiaonensis [FOBC] 18793 18869 + Arg TCT [ENA] ¡û
Identical group No.183917 (7 seq.)
>W1711168342 LVXZ01000074 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 16468 16544 + Arg TCT [ENA] ¡û
>C08000435 CP001132 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 53993 [CP001132] 944354 944281 - Arg TCT [Ensembl] ¡û
>C09100413 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 770164 770088 - Arg TCT [Ensembl] ¡û
>W1810679266 QKQP01000001 Acidithiobacillia Acidithiobacillus ferrooxidans CCM 4253 [QKQP] 537352 537428 + Arg TCT [ENA] ¡û
>W10127998 AEFB01001230 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 376 452 + Arg TCT [ENA] ¡û
>W11135543 AEFB01001230 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 376 452 + Arg TCT [ENA] ¡û
>W1610978257 LVXZ01000074 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 16468 16544 + Arg TCT [ENA] ¡û
Identical group No.200333 (7 seq.)
>W1711169863 LVZL01000011 Acidithiobacillia Acidithiobacillus ferrivorans [LVZL] 159629 159553 - Arg TCT [ENA] ¡û
>W1711312173 MASQ01000091 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 2045 1969 - Arg TCT [ENA] ¡û
>W141262894 CCCS020000003 Acidithiobacillia Acidithiobacillus ferrivorans [CCCS] 34073 33997 - Arg TCT [ENA] ¡û
>WENV170008637 AOMQ01010856 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 441 365 - Arg TCT [ENA] ¢þ
>C11100753 CP002985 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [CP002985] 1359657 1359581 - Arg TCT [Ensembl] ¡û
>W11164267 AFJD01000005 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [AFJD] 125345 125421 + Arg TCT [ENA] ¡û
>W1611057374 MASQ01000091 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 2045 1969 - Arg TCT [ENA] ¡û
Identical group No.207968 (2 seq.)
>C191005124 AP018795 Acidithiobacillia Acidithiobacillus ferridurans JCM 18981 [AP018795] 2001402 2001326 - Arg TCT - ¡û
>W1810257132 PQJK01000004 Acidithiobacillia Acidithiobacillus ferridurans IO-2C [PQJK] 206763 206839 + Arg TCT [ENA] ¡û
Identical group No.209781 (9 seq.)
>W1711190254 LWRY01000053 Acidithiobacillia Acidithiobacillus thiooxidans [LWRY] 12573 12497 - Arg TCT [ENA] ¡û
>W1711190329 LWRZ01000029 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 23107 23183 + Arg TCT [ENA] ¡û
>W1711190433 LWSA01000143 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 4831 4755 - Arg TCT [ENA] ¡û
>W1711190561 LWSB01000182 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 4863 4787 - Arg TCT [ENA] ¡û
>W1711190609 LWSC01000048 Acidithiobacillia Acidithiobacillus thiooxidans [LWSC] 11000 10924 - Arg TCT [ENA] ¡û
>W1711190670 LWSD01000032 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 18922 18998 + Arg TCT [ENA] ¡û
>W1711293195 LZYI01000116 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 4849 4773 - Arg TCT [ENA] ¡û
>W141206818 AZMO01000080 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 4760 4684 - Arg TCT [ENA] ¡û
>W1710743671 LGYM01000007 Acidithiobacillia Acidithiobacillus thiooxidans [LGYM] 25646 25722 + Arg TCT [ENA] ¡û
Identical group No.209783 (19 seq.)
>W1710777639 LJBT01000013 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 219134 219210 + Arg TCT [ENA] ¡û
>W1711010481 LQRJ01000055 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 25652 25576 - Arg TCT [ENA] ¡û
>W1711190267 LWRY01000145 Acidithiobacillia Acidithiobacillus thiooxidans [LWRY] 19250 19174 - Arg TCT [ENA] ¡û
>W1711190352 LWRZ01000120 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 25012 25088 + Arg TCT [ENA] ¡û
>W1711190408 LWSA01000095 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 31692 31616 - Arg TCT [ENA] ¡û
>W1711190481 LWSB01000012 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 22209 22133 - Arg TCT [ENA] ¡û
>W1711190585 LWSC01000019 Acidithiobacillia Acidithiobacillus thiooxidans [LWSC] 26857 26933 + Arg TCT [ENA] ¡û
>W1711190688 LWSD01000117 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 17515 17591 + Arg TCT [ENA] ¡û
>W1711293211 LZYI01000244 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 15602 15678 + Arg TCT [ENA] ¡û
>W1711585814 MOAD01000001 Acidithiobacillia Acidithiobacillus albertensis [MOAD] 1982193 1982269 + Arg TCT [ENA] ¡û
>W141206779 AZMO01000026 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 31623 31547 - Arg TCT [ENA] ¡û
>W141695596 JMEB01000202 Acidithiobacillia Acidithiobacillus thiooxidans [JMEB] 2305 2381 + Arg TCT [ENA] ¡û
>W1910831832 MXAV01000013 Acidithiobacillia Acidithiobacillus marinus SH [MXAV] 80235 80159 - Arg TCT [ENA] ¡û
>W11168554 AFOH01000132 Acidithiobacillia Acidithiobacillus thiooxidans ATCC 19377 [AFOH] 2305 2381 + Arg TCT [ENA] ¡û
>W1610627893 LIEB01000017 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 219108 219184 + Arg TCT [ENA] ¡û
>W1610641825 LJBT01000013 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 219134 219210 + Arg TCT [ENA] ¡û
>W1610859001 LQRJ01000055 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 25652 25576 - Arg TCT [ENA] ¡û
>W1710743684 LGYM01000021 Acidithiobacillia Acidithiobacillus thiooxidans [LGYM] 4444 4368 - Arg TCT [ENA] ¡û
>W1710759020 LIEB01000017 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 219108 219184 + Arg TCT [ENA] ¡û
Identical group No.209874 (7 seq.)
>W1710799189 LJUK01000117 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 1681 1757 + Arg TCT [ENA] ¡û
>W1710799761 LJVB01000066 Acidithiobacillia Acidithiobacillales bacterium SM1_46 [LJVB] 1636 1712 + Arg TCT [ENA] ¡û
>W1711403000 MFSP01000032 Unclassified Candidatus Muproteobacteria bacterium RBG_16_60_9 [MFSP] 19844 19768 - Arg TCT [ENA] ¡û
>WENV180353583 OBLQ010879855 [OBLQ] soil metagenome; soil 243 167 - Arg TCT [ENA] ¢þ
>W1610663146 LJUK01000117 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 1681 1757 + Arg TCT [ENA] ¡û
>W1610663718 LJVB01000066 Acidithiobacillia Acidithiobacillales bacterium SM1_46 [LJVB] 1636 1712 + Arg TCT [ENA] ¡û
>W1730027550 MFSS01000108 Unclassified Candidatus Muproteobacteria bacterium RBG_16_64_11 [MFSS] 5612 5688 + Arg TCT [ENA] ¡û
Identical group No.211240 (26 seq.)
>W131171835 ARGN01000026 Betaproteobacteria Chitiniphilus shinanonensis DSM 23277 [ARGN] 59719 59795 + Arg TCT [ENA] ¡û
>W131231756 AUIS01000001 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 70568 70492 - Arg TCT [ENA] ¡û
>WENV180042649 LQAF01016641 [LQAF] bioreactor metagenome; bioreactor_2 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that 105 181 + Arg TCT [ENA] ¢þ
>WENV180299045 OBJA01916548 [OBJA] soil metagenome; sediment, water from around vicinity 97 21 - Arg TCT [ENA] ¢þ
>WENV181307467 OFIQ01007103 [OFIQ] marine metagenome; seawater 277 201 - Arg TCT [ENA] ¢þ
>WENV170015487 AZIH01000462 [AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port 854 778 - Arg TCT [ENA] ¢þ
>WENV170112057 CEGC01005250 [CEGC] microbial mat metagenome; grass silage 3582 3506 - Arg TCT [ENA] ¢þ
>WENV170112211 CEGD01022905 [CEGD] microbial mat metagenome; grass silage 969 1045 + Arg TCT [ENA] ¢þ
>WENV170112250 CEGE01000271 [CEGE] microbial mat metagenome; grass silage 4512 4436 - Arg TCT [ENA] ¢þ
>WENV170112510 CEGF01002034 [CEGF] microbial mat metagenome; grass silage 274 198 - Arg TCT [ENA] ¢þ
>WENV170112518 CEGF01002037 [CEGF] microbial mat metagenome; grass silage 227 151 - Arg TCT [ENA] ¢þ
>WENV170170504 CEOQ01006940 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1460 1384 - Arg TCT [ENA] ¢þ
>WENV170463043 CEVD01106427 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 235 159 - Arg TCT [ENA] ¢þ
>WENV170656321 JTFO01010033 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 1469 1545 + Arg TCT [ENA] ¢þ
>WENV170803167 MDSW01025814 [MDSW] marine metagenome; seawater 3172 3248 + Arg TCT [ENA] ¢þ
>WENV170916977 MDTE01185809 [MDTE] marine metagenome; seawater 28309 28233 - Arg TCT [ENA] ¢þ
>W141713666 JMSZ01000021 Gammaproteobacteria Nitrincola lacisaponensis [JMSZ] 208773 208849 + Arg TCT [ENA] ¡û
>W141727047 JNCK01000001 Gammaproteobacteria Halomonas zincidurans B6 [JNCK] 1781354 1781278 - Arg TCT [ENA] ¡û
>W09102567 AAHZ01000023 Gammaproteobacteria Chromohalobacter salexigens DSM 3043 [AAHZ] 176 252 + Arg TCT [ENA] ¡û
>W1910840518 MZZK01000001 Gammaproteobacteria Chromohalobacter salexigens ANJ 207 [MZZK] 2452830 2452754 - Arg TCT [ENA] ¡û
>W1511334724 JQNW01000001 Gammaproteobacteria Chromohalobacter israelensis 6768 [JQNW] 233348 233272 - Arg TCT [ENA] ¡û
>W1511349195 JRLB01000099 Gammaproteobacteria Nitrincola sp. A-D6 [JRLB] 18100 18176 + Arg TCT [ENA] ¡û
>W11170405 AFPL01000026 Gammaproteobacteria Marinobacterium stanieri S30 [AFPL] 51536 51612 + Arg TCT [ENA] ¡û
>W1710533740 FNRJ01000002 Gammaproteobacteria Marinobacterium iners DSM 11526 [FNRJ] 57518 57442 - Arg TCT [ENA] ¡û
>W1710578489 FPBP01000012 Gammaproteobacteria Halomonas korlensis [FPBP] 42907 42831 - Arg TCT [ENA] ¡û
>W1710596375 FTMN01000002 Gammaproteobacteria Marinobacterium stanieri [FTMN] 11764 11688 - Arg TCT [ENA] ¡û
Identical group No.254252 (2 seq.)
>W10127973 AEFB01000308 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 1035 959 - Arg TCT [ENA] ¡û
>W11135518 AEFB01000308 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 1035 959 - Arg TCT [ENA] ¡û
Identical group No.289062 (1 seq.)
>C09100411 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 1027220 1027145 - Arg TCT [Ensembl] ¡û
Identical group No.393280 (1 seq.)
>W141738826 JNNH01000043 Acidithiobacillia Acidithiobacillus ferrooxidans ferriphilum [JNNH] 17133 17208 + Arg TCT [ENA] ¡û
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
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