tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = CAC

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.512638 (5 seq.)
>W1711137566 LVBO01000290 Synergistota Synergistales bacterium Syner_01 [LVBO] 1927 1852 - Val CAC [ENA] ¡û
>WENV180097749 MTBK01208941 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 94626 94701 + Val CAC [ENA] ¢þ
>WENV180346100 OBLN01026168 [OBLN] sediment metagenome; sediment 348 273 - Val CAC [ENA] ¢þ
>WENV170723509 LSQX01271537 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 1695 1770 + Val CAC [ENA] ¢þ
>W1610948686 LVBO01000290 Synergistota Synergistales bacterium Syner_01 [LVBO] 1927 1852 - Val CAC [ENA] ¡û
Identical group No.516404 (10 seq.)
>WENV180731838 ODGW01019857 [ODGW] human metagenome; G_DNA_Supragingival plaque 585 660 + Val CAC [ENA] ¢þ
>WENV180751572 ODHS01076030 [ODHS] human metagenome; G_DNA_Supragingival plaque 469 394 - Val CAC [ENA] ¢þ
>WENV180798107 ODJB01260597 [ODJB] human metagenome; G_DNA_Supragingival plaque 165 240 + Val CAC [ENA] ¢þ
>WENV180944160 ODUC01009283 [ODUC] human metagenome; G_DNA_Supragingival plaque 1519 1444 - Val CAC [ENA] ¢þ
>WENV180981319 ODVE01015141 [ODVE] human metagenome; G_DNA_Supragingival plaque 1962 1887 - Val CAC [ENA] ¢þ
>WENV181050399 ODYD01017188 [ODYD] human metagenome; G_DNA_Supragingival plaque 1857 1782 - Val CAC [ENA] ¢þ
>WENV181076572 OEAP01007879 [OEAP] human metagenome; G_DNA_Supragingival plaque 2594 2669 + Val CAC [ENA] ¢þ
>WENV181180266 OEJT01180940 [OEJT] human metagenome; G_DNA_Supragingival plaque 130 55 - Val CAC [ENA] ¢þ
>WENV181182875 OEJV01063847 [OEJV] human metagenome; G_DNA_Supragingival plaque 266 341 + Val CAC [ENA] ¢þ
>C161104057 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 213301 213226 - Val CAC - ¡û
Identical group No.658539 (9 seq.)
>WENV181230209 OFEK01000419 [OFEK] activated sludge metagenome; Anaerobic digester 43807 43733 - Val CAC [ENA] ¢þ
>WENV170678352 LDZT01014020 [LDZT] terrestrial metagenome; oil reservoir sample SB1 13383 13457 + Val CAC [ENA] ¢þ
>WENV170717683 LSQX01045764 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 7791 7717 - Val CAC [ENA] ¢þ
>WENV170967346 MTKW01001001 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 81953 82027 + Val CAC [ENA] ¢þ
>WENV170971378 MTKX01004540 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 18920 18846 - Val CAC [ENA] ¢þ
>WENV170973931 MTKY01051890 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 6208 6282 + Val CAC [ENA] ¢þ
>WENV170978268 MTKZ01044974 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 7190 7264 + Val CAC [ENA] ¢þ
>W1610613704 LGGE01000013 Synergistota Synergistales bacterium 57_84 [LGGE] 13383 13457 + Val CAC [ENA] ¡û
>W1710734857 LGGE01000013 Synergistota Synergistales bacterium 57_84 [LGGE] 13383 13457 + Val CAC [ENA] ¡û
Identical group No.658647 (10 seq.)
>WENV170563004 CZCB01008584 [CZCB] anaerobic digester metagenome; anaerobic digester 8040 7966 - Val CAC [ENA] ¢þ
>WENV170676935 LDZS01003257 [LDZS] terrestrial metagenome; oil reservoir sample K3 6990 6916 - Val CAC [ENA] ¢þ
>WENV170685151 LFRM01075334 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 23548 23474 - Val CAC [ENA] ¢þ
>WENV170686334 LFRM01139342 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 7827 7753 - Val CAC [ENA] ¢þ
>WENV170716725 LSQX01009735 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 10575 10501 - Val CAC [ENA] ¢þ
>WENV170723088 LSQX01254763 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3007 3081 + Val CAC [ENA] ¢þ
>WENV170968304 MTKW01007969 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 585 659 + Val CAC [ENA] ¢þ
>WENV170969396 MTKW01027739 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 894 968 + Val CAC [ENA] ¢þ
>W1610613303 LGFQ01000077 Synergistota Synergistales bacterium 54_24 [LGFQ] 6990 6916 - Val CAC [ENA] ¡û
>W1710734510 LGFQ01000077 Synergistota Synergistales bacterium 54_24 [LGFQ] 6990 6916 - Val CAC [ENA] ¡û
Identical group No.673446 (12 seq.)
>WENV170008121 AMZC01002271 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 524 450 - Val CAC [ENA] ¢þ
>WENV170563689 CZCB01025451 [CZCB] anaerobic digester metagenome; anaerobic digester 5761 5687 - Val CAC [ENA] ¢þ
>WENV170677182 LDZT01003517 [LDZT] terrestrial metagenome; oil reservoir sample SB1 79 153 + Val CAC [ENA] ¢þ
>WENV170679040 LDZU01006776 [LDZU] terrestrial metagenome; oil reservoir sample SB2 79 153 + Val CAC [ENA] ¢þ
>W09126635 ACJX01000211 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 308 382 + Val CAC [ENA] ¡û
>C121008068 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 1276723 1276797 + Val CAC [Ensembl] ¡û
>W1610613643 LGGB01000269 Synergistota Synergistales bacterium 53_16 [LGGB] 79 153 + Val CAC [ENA] ¡û
>W1610614487 LGHG01000027 Synergistota Synergistales bacterium 54_9 [LGHG] 79 153 + Val CAC [ENA] ¡û
>W1710530836 FNPD01000005 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 144973 145047 + Val CAC [ENA] ¡û
>W1710594071 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 1857199 1857125 - Val CAC [ENA] ¡û
>W1710734815 LGGB01000269 Synergistota Synergistales bacterium 53_16 [LGGB] 79 153 + Val CAC [ENA] ¡û
>W1710735468 LGHG01000027 Synergistota Synergistales bacterium 54_9 [LGHG] 79 153 + Val CAC [ENA] ¡û
Identical group No.674602 (19 seq.)
>W1711137629 LVBQ01000074 Synergistota Synergistales bacterium Syner_03 [LVBQ] 14171 14245 + Val CAC [ENA] ¡û
>W1712039362 NFJQ01000002 Synergistota Cloacibacillus sp. An23 [NFJQ] 174498 174424 - Val CAC [ENA] ¡û
>WENV180963592 ODUN01269315 [ODUN] human metagenome; G_DNA_Stool 140 66 - Val CAC [ENA] ¢þ
>WENV181865516 OGWU01035640 [OGWU] human gut metagenome; faeces 853 779 - Val CAC [ENA] ¢þ
>WENV181908458 OGYB01000037 [OGYB] human gut metagenome; faeces 46447 46521 + Val CAC [ENA] ¢þ
>WENV182172336 OHMY01002713 [OHMY] human gut metagenome; feces 942 1016 + Val CAC [ENA] ¢þ
>WENV182364654 OICH01014090 [OICH] human gut metagenome; feces 1007 933 - Val CAC [ENA] ¢þ
>WENV170690943 LFRM01372112 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 219 293 + Val CAC [ENA] ¢þ
>WENV170691560 LFRM01402870 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 2713 2639 - Val CAC [ENA] ¢þ
>WENV170722777 LSQX01242759 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3059 3133 + Val CAC [ENA] ¢þ
>W141452048 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 517745 517671 - Val CAC [ENA] ¡û
>W141701223 JMKI01000047 Synergistota Synergistes jonesii [JMKI] 18010 17936 - Val CAC [ENA] ¡û
>W121000494 ACUH01000051 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 93163 93237 + Val CAC [ENA] ¡û
>W1610948749 LVBQ01000074 Synergistota Synergistales bacterium Syner_03 [LVBQ] 14171 14245 + Val CAC [ENA] ¡û
>W1710629264 JPZQ01000056 Synergistota Synergistes jonesii [JPZQ] 17180 17106 - Val CAC [ENA] ¡û
>W1710629305 JPZR01000046 Synergistota Synergistes jonesii [JPZR] 17183 17109 - Val CAC [ENA] ¡û
>W1710629347 JPZS01000048 Synergistota Synergistes jonesii [JPZS] 17180 17106 - Val CAC [ENA] ¡û
>W1710631833 JQEK01000023 Synergistota Synergistes jonesii [JQEK] 17181 17107 - Val CAC [ENA] ¡û
>W1710631898 JQEL01000049 Synergistota Synergistes jonesii [JQEL] 17181 17107 - Val CAC [ENA] ¡û
Identical group No.676118 (5 seq.)
>W1711629572 MPPC01000025 Synergistota Aminobacterium sp. EBM-42 [MPPC] 52405 52479 + Val CAC [ENA] ¡û
>W141279012 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 735989 735915 - Val CAC [ENA] ¡û
>WENV170657287 JTFO01117770 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 148 222 + Val CAC [ENA] ¢þ
>WENV170717390 LSQX01034008 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 6084 6010 - Val CAC [ENA] ¢þ
>C10100316 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 1482118 1482192 + Val CAC [Ensembl] ¡û
Identical group No.706763 (9 seq.)
>W1711744483 MUHX01000002 Synergistota Pyramidobacter sp. C12-8 [MUHX] 107943 108017 + Val CAC [ENA] ¡û
>WENV181438196 OGDH01023333 [OGDH] metagenome; Human gut stool 424 350 - Val CAC [ENA] ¢þ
>W141146830 AWWC01000001 Synergistota Jonquetella sp. BV3C21 [AWWC] 35838 35912 + Val CAC [ENA] ¡û
>WENV181988942 OHAO01001567 [OHAO] human gut metagenome; faeces 10993 11067 + Val CAC [ENA] ¢þ
>WENV183763838 PPYE01311113 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 54090 54016 - Val CAC [ENA] ¢þ
>W09132987 ACOO02000031 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 83338 83264 - Val CAC [ENA] ¡û
>W10113028 ADFP01000071 Synergistota Pyramidobacter piscolens W5455 [ADFP] 21761 21687 - Val CAC [ENA] ¡û
>W11116255 ADFP01000071 Synergistota Pyramidobacter piscolens W5455 [ADFP] 21761 21687 - Val CAC [ENA] ¡û
>W121017516 AGRU01000004 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 174197 174123 - Val CAC [ENA] ¡û
Identical group No.706863 (1 seq.)
>W11138602 AEIV01000001 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 915900 915826 - Val CAC [ENA] ¡û
Identical group No.716704 (4 seq.)
>C171050548 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1887551 1887625 + Val CAC - ¡û
>WENV181910671 OGYC01029531 [OGYC] human gut metagenome; faeces 56 130 + Val CAC [ENA] ¢þ
>WENV181915885 OGYF01023162 [OGYF] human gut metagenome; faeces 279 205 - Val CAC [ENA] ¢þ
>WENV181989739 OHAO01038542 [OHAO] human gut metagenome; faeces 25 99 + Val CAC [ENA] ¢þ
Identical group No.718822 (3 seq.)
>WENV170677177 LDZT01003462 [LDZT] terrestrial metagenome; oil reservoir sample SB1 985 911 - Val CAC [ENA] ¢þ
>W1610613638 LGGB01000214 Synergistota Synergistales bacterium 53_16 [LGGB] 985 911 - Val CAC [ENA] ¡û
>W1710734810 LGGB01000214 Synergistota Synergistales bacterium 53_16 [LGGB] 985 911 - Val CAC [ENA] ¡û
Identical group No.721551 (2 seq.)
>W131157332 AQRZ01000053 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 29763 29837 + Val CAC [ENA] ¡û
>WENV170007812 AMWB02159040 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 1073 1147 + Val CAC [ENA] ¢þ
Identical group No.744210 (2 seq.)
>WENV170656543 JTFO01023742 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 306 232 - Val CAC [ENA] ¢þ
>W09108888 ABTR01000001 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 172764 172838 + Val CAC [ENA] ¡û
Identical group No.750735 (2 seq.)
>WENV170655541 JTFN01042650 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 1265 1339 + Val CAC [ENA] ¢þ
>W1710608710 FXBB01000021 Synergistota Dethiosulfovibrio salsuginis [FXBB] 42431 42357 - Val CAC [ENA] ¡û
Identical group No.752745 (4 seq.)
>WENV181409286 OGCI01000066 [OGCI] hot springs metagenome; Hot spring water 79090 79164 + Val CAC [ENA] ¢þ
>W09110125 ABUW01000002 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 176361 176287 - Val CAC [ENA] ¡û
>C10112990 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1407689 1407763 + Val CAC [Ensembl] ¡û
>W121031652 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 448152 448078 - Val CAC [ENA] ¡û
Identical group No.762364 (2 seq.)
>W141278985 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 76660 76586 - Val CAC [ENA] ¡û
>W141278986 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 67927 67853 - Val CAC [ENA] ¡û
Identical group No.771938 (1 seq.)
>C121005691 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1436731 1436805 + Val CAC [Ensembl] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK