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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
119 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183541766
OOAM01000021
263765
Bacillota
TAC
Val
>WENV183541773
OOAM01000027
155089
Bacillota
CAT
Met
>WENV183541812
OOAM01000076
414486
Bacillota
CCC
Gly
>WENV183541815
OOAM01000091
344240
Bacillota
GCC
Gly
>WENV183541817
OOAM01000095
238974
Bacillota
GAA
Phe
>WENV183541844
OOAM01000126
235142
Bacillota
CTT
Lys
>WENV183541873
OOAM01000168
411547
Bacillota
CTG
Gln
>WENV183541883
OOAM01000179
338147
Bacillota
CTC
Glu
>WENV183541884
OOAM01000180
59312
Bacillota
CAG
Leu
>WENV183541898
OOAM01000204
235697
Bacillota
GTT
Asn
>WENV183541908
OOAM01000216
59312
Bacillota
CAG
Leu
>WENV183541910
OOAM01000218
235134
Bacillota
GAA
Phe
>WENV183541911
OOAM01000218
240017
Bacillota
GCC
Gly
>WENV183541939
OOAM01000250
239080
Bacillota
CTG
Gln
>WENV183541944
OOAM01000269
95563
Bacillota
GTA
Tyr
>WENV183541975
OOAM01000347
44859
Bacillota
AAG
Leu
>WENV183541998
OOAM01000394
411547
Bacillota
CTG
Gln
>WENV183542007
OOAM01000412
37071
Bacillota
TGA
Ser
>WENV183542041
OOAM01000491
256380
Bacillota
>WENV183542044
OOAM01000496
235142
Bacillota
CTT
Lys
>WENV183542052
OOAM01000505
235114
Bacillota
TTT
Lys
>WENV183542051
OOAM01000505
235113
Bacillota
GAA
Phe
>WENV183542066
OOAM01000560
248965
Bacillota
GCC
Gly
>WENV183542068
OOAM01000564
245344
Bacillota
GAA
Phe
>WENV183542072
OOAM01000586
37269
Bacillota
TGA
Ser
>WENV183542075
OOAM01000598
419639
Bacillota
GCA
Cys
>WENV183542084
OOAM01000626
338147
Bacillota
CTC
Glu
>WENV183542101
OOAM01000677
114075
Bacillota
TAG
Leu
>WENV183542120
OOAM01000736
411547
Bacillota
CTG
Gln
>WENV183542128
OOAM01000783
235098
Bacillota
GAC
Val
>WENV183542147
OOAM01000846
338129
Bacillota
TGT
Thr
>WENV183542164
OOAM01000948
238974
Bacillota
GAA
Phe
>WENV183542167
OOAM01000951
44854
Bacillota
TGA
Ser
>WENV183542168
OOAM01000951
4624
Bacillota
GCT
Ser
>WENV183542171
OOAM01000973
245298
Bacillota
CGG
Pro
>WENV183542170
OOAM01000973
411547
Bacillota
CTG
Gln
>WENV183542172
OOAM01000973
411549
Bacillota
TTG
Gln
>WENV183542175
OOAM01000981
235124
Bacillota
TGG
Pro
>WENV183542185
OOAM01001021
338128
Bacillota
TTC
Glu
>WENV183542188
OOAM01001030
340265
Bacillota
GCC
Gly
>WENV183542187
OOAM01001030
340265
Bacillota
GCC
Gly
>WENV183542192
OOAM01001036
243098
Bacillota
GGT
Thr
>WENV183542194
OOAM01001045
338129
Bacillota
TGT
Thr
>WENV183542199
OOAM01001074
148348
Bacillota
GTC
Asp
>WENV183542200
OOAM01001074
239076
Bacillota
GAA
Phe
>WENV183542201
OOAM01001074
239079
Bacillota
TAC
Val
>WENV183542221
OOAM01001200
338128
Bacillota
TTC
Glu
>WENV183542227
OOAM01001241
245298
Bacillota
CGG
Pro
>WENV183542226
OOAM01001241
411547
Bacillota
CTG
Gln
>WENV183542230
OOAM01001246
153911
Bacillota
GAT
Ile
>WENV183542232
OOAM01001251
245296
Bacillota
CCC
Gly
>WENV183542256
OOAM01001400
144612
Bacillota
TCT
Arg
>WENV183542261
OOAM01001416
340263
Bacillota
TTC
Glu
>WENV183542260
OOAM01001416
239078
Bacillota
TTT
Lys
>WENV183542266
OOAM01001505
11034
Bacillota
GGA
Ser
>WENV183542276
OOAM01001553
338147
Bacillota
CTC
Glu
>WENV183542297
OOAM01001728
235098
Bacillota
GAC
Val
>WENV183542298
OOAM01001732
411549
Bacillota
TTG
Gln
>WENV183542306
OOAM01001811
256380
Bacillota
>WENV183542319
OOAM01001953
411549
Bacillota
TTG
Gln
>WENV183542321
OOAM01001987
144612
Bacillota
TCT
Arg
>WENV183542328
OOAM01002055
37213
Bacillota
TGA
Ser
>WENV183542331
OOAM01002125
11034
Bacillota
GGA
Ser
>WENV183542349
OOAM01002457
249259
Bacillota
GCC
Gly
>WENV183542351
OOAM01002527
58712
Bacillota
CAG
Leu
>WENV183542364
OOAM01002703
261708
Bacillota
CCA
Trp
>WENV183542372
OOAM01002836
44854
Bacillota
TGA
Ser
>WENV183542373
OOAM01002836
4624
Bacillota
GCT
Ser
>WENV183542374
OOAM01002871
58712
Bacillota
CAG
Leu
>WENV183542377
OOAM01002974
338149
Bacillota
CTC
Glu
>WENV183542378
OOAM01002974
144621
Bacillota
GTT
Asn
>WENV183542383
OOAM01003058
235079
Bacillota
GAA
Phe
>WENV183542384
OOAM01003058
249259
Bacillota
GCC
Gly
>WENV183542394
OOAM01003108
340265
Bacillota
GCC
Gly
>WENV183542399
OOAM01003162
235095
Bacillota
GGT
Thr
>WENV183542405
OOAM01003204
338149
Bacillota
CTC
Glu
>WENV183542406
OOAM01003204
144621
Bacillota
GTT
Asn
>WENV183542407
OOAM01003227
242686
Bacillota
TGC
Ala
>WENV183542410
OOAM01003278
148188
Bacillota
CCG
Arg
>WENV183542412
OOAM01003363
144594
Bacillota
CAC
Val
>WENV183542422
OOAM01003531
144594
Bacillota
CAC
Val
>WENV183542434
OOAM01003814
148239
Bacillota
TCT
Arg
>WENV183542435
OOAM01003814
156937
Bacillota
GTG
His
>WENV183542443
OOAM01003840
58712
Bacillota
CAG
Leu
>WENV183542448
OOAM01003973
235095
Bacillota
GGT
Thr
>WENV183542472
OOAM01004553
235171
Bacillota
CCA
Trp
>WENV183542488
OOAM01005056
44854
Bacillota
TGA
Ser
>WENV183542489
OOAM01005056
4624
Bacillota
GCT
Ser
>WENV183542492
OOAM01005142
245298
Bacillota
CGG
Pro
>WENV183542491
OOAM01005142
411547
Bacillota
CTG
Gln
>WENV183542495
OOAM01005261
338149
Bacillota
CTC
Glu
>WENV183542496
OOAM01005261
144621
Bacillota
GTT
Asn
>WENV183542501
OOAM01005359
338149
Bacillota
CTC
Glu
>WENV183542502
OOAM01005359
144621
Bacillota
GTT
Asn
>WENV183542507
OOAM01005693
148188
Bacillota
CCG
Arg
>WENV183542515
OOAM01005888
235095
Bacillota
GGT
Thr
>WENV183542516
OOAM01005953
411549
Bacillota
TTG
Gln
>WENV183542538
OOAM01006666
338128
Bacillota
TTC
Glu
>WENV183542561
OOAM01007659
80612
Bacillota
GTA
Tyr
>WENV183542572
OOAM01008326
238945
Bacillota
GCC
Gly
>WENV183542587
OOAM01008882
148188
Bacillota
CCG
Arg
>WENV183542589
OOAM01009098
59296
Bacillota
AAG
Leu
>WENV183542607
OOAM01009878
235294
Bacillota
TGC
Ala
>WENV183542615
OOAM01010450
59312
Bacillota
CAG
Leu
>WENV183542622
OOAM01011233
243401
Bacillota
CGT
Thr
>WENV183542638
OOAM01012106
156189
Bacillota
GAT
Ile
>WENV183542639
OOAM01012106
241471
Bacillota
TGC
Ala
>WENV183542655
OOAM01014539
247734
Bacillota
TGC
Ala
>WENV183542687
OOAM01017298
246392
Bacillota
GTT
Asn
>WENV183542694
OOAM01019023
411547
Bacillota
CTG
Gln
>WENV183542700
OOAM01020857
238910
Bacillota
CTT
Lys
>WENV183542704
OOAM01021341
153911
Bacillota
GAT
Ile
>WENV183542721
OOAM01025848
341763
Bacillota
CTC
Glu
>WENV183542748
OOAM01031369
59312
Bacillota
CAG
Leu
>WENV183542755
OOAM01032428
246023
Bacillota
TGC
Ala
>WENV183542772
OOAM01039361
235150
Bacillota
TGC
Ala
>WENV183542784
OOAM01044598
235171
Bacillota
CCA
Trp
>WENV183542788
OOAM01048653
152051
Bacillota
ACG
Arg
>WENV183542789
OOAM01049393
340131
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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