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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183559248
OOBS01001122
144612
Bacillota
TCT
Arg
>WENV183559213
OOBS01000766
267556
Bacillota
TAC
Val
>WENV183559429
OOBS01009263
235098
Bacillota
GAC
Val
>WENV183559447
OOBS01010693
235098
Bacillota
GAC
Val
>WENV183559228
OOBS01000885
340263
Bacillota
TTC
Glu
>WENV183559273
OOBS01001329
340263
Bacillota
TTC
Glu
>WENV183559436
OOBS01009752
148239
Bacillota
TCT
Arg
>WENV183559418
OOBS01008108
44854
Bacillota
TGA
Ser
>WENV183559266
OOBS01001329
148348
Bacillota
GTC
Asp
>WENV183559230
OOBS01000885
148348
Bacillota
GTC
Asp
>WENV183559189
OOBS01000440
239080
Bacillota
CTG
Gln
>WENV183559205
OOBS01000705
238910
Bacillota
CTT
Lys
>WENV183559512
OOBS01025342
235150
Bacillota
TGC
Ala
>WENV183559455
OOBS01012412
235137
Bacillota
TGC
Ala
>WENV183559376
OOBS01004944
11034
Bacillota
GGA
Ser
>WENV183559275
OOBS01001352
235117
Bacillota
TAC
Val
>WENV183559267
OOBS01001329
239076
Bacillota
GAA
Phe
>WENV183559231
OOBS01000885
239076
Bacillota
GAA
Phe
>WENV183559135
OOBS01000160
243646
Bacillota
GTT
Asn
>WENV183559136
OOBS01000160
235697
Bacillota
GTT
Asn
>WENV183559372
OOBS01004937
235079
Bacillota
GAA
Phe
>WENV183559357
OOBS01004459
235079
Bacillota
GAA
Phe
>WENV183559288
OOBS01001512
235079
Bacillota
GAA
Phe
>WENV183559277
OOBS01001352
235079
Bacillota
GAA
Phe
>WENV183559222
OOBS01000838
340265
Bacillota
GCC
Gly
>WENV183559221
OOBS01000838
340265
Bacillota
GCC
Gly
>WENV183559484
OOBS01018813
173314
Bacillota
GAT
Ile
>WENV183559482
OOBS01018366
245298
Bacillota
CGG
Pro
>WENV183559497
OOBS01023031
144599
Bacillota
GTC
Asp
>WENV183559466
OOBS01013692
100326
Bacillota
GTA
Tyr
>WENV183559196
OOBS01000526
100326
Bacillota
GTA
Tyr
>WENV183559437
OOBS01009752
144610
Bacillota
GTG
His
>WENV183559474
OOBS01015653
4624
Bacillota
GCT
Ser
>WENV183559473
OOBS01015084
235095
Bacillota
GGT
Thr
>WENV183559343
OOBS01003120
241471
Bacillota
TGC
Ala
>WENV183559232
OOBS01000885
239079
Bacillota
TAC
Val
>WENV183559229
OOBS01000885
239079
Bacillota
TAC
Val
>WENV183559260
OOBS01001239
411549
Bacillota
TTG
Gln
>WENV183559293
OOBS01001512
80612
Bacillota
GTA
Tyr
>WENV183559324
OOBS01002531
256380
Bacillota
>WENV183559463
OOBS01012649
235124
Bacillota
TGG
Pro
>WENV183559498
OOBS01023031
254433
Bacillota
TAC
Val
>WENV183559285
OOBS01001439
338129
Bacillota
TGT
Thr
>WENV183559449
OOBS01010881
144583
Bacillota
ACG
Arg
>WENV183559431
OOBS01009446
238974
Bacillota
GAA
Phe
>WENV183559296
OOBS01001576
238974
Bacillota
GAA
Phe
>WENV183559515
OOBS01025927
148495
Bacillota
TCT
Arg
>WENV183559362
OOBS01004503
243098
Bacillota
GGT
Thr
>WENV183559411
OOBS01007245
58712
Bacillota
CAG
Leu
>WENV183559280
OOBS01001372
58712
Bacillota
CAG
Leu
>WENV183559464
OOBS01012878
245296
Bacillota
CCC
Gly
>WENV183559398
OOBS01005485
272992
Bacillota
CTT
Lys
>WENV183559227
OOBS01000885
239078
Bacillota
TTT
Lys
>WENV183559123
OOBS01000124
261708
Bacillota
CCA
Trp
>WENV183559450
OOBS01010975
144594
Bacillota
CAC
Val
>WENV183559475
OOBS01016040
249259
Bacillota
GCC
Gly
>WENV183559373
OOBS01004937
249259
Bacillota
GCC
Gly
>WENV183559358
OOBS01004459
249259
Bacillota
GCC
Gly
>WENV183559291
OOBS01001512
249259
Bacillota
GCC
Gly
>WENV183559289
OOBS01001512
249259
Bacillota
GCC
Gly
>WENV183559278
OOBS01001352
249259
Bacillota
GCC
Gly
>WENV183559274
OOBS01001352
249259
Bacillota
GCC
Gly
>WENV183559483
OOBS01018813
273862
Bacillota
TGC
Ala
>WENV183559400
OOBS01005778
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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