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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183599431
OODH01000602
144612
Bacillota
TCT
Arg
>WENV183599453
OODH01000728
144612
Bacillota
TCT
Arg
>WENV183599553
OODH01001592
144612
Bacillota
TCT
Arg
>WENV183600035
OODH01042868
235693
Bacillota
GGT
Thr
>WENV183599925
OODH01023417
246392
Bacillota
GTT
Asn
>WENV183599989
OODH01034085
23769
Bacillota
TAA
Leu
>WENV183599614
OODH01002542
44854
Bacillota
TGA
Ser
>WENV183599901
OODH01019819
37549
Bacillota
TAA
Leu
>WENV183599934
OODH01023616
246023
Bacillota
TGC
Ala
>WENV183599367
OODH01000373
59312
Bacillota
CAG
Leu
>WENV183599906
OODH01020591
243119
Bacillota
CTT
Lys
>WENV183599244
OODH01000056
245370
Bacillota
TGT
Thr
>WENV183599722
OODH01004791
338147
Bacillota
CTC
Glu
>WENV183599876
OODH01016753
152047
Bacillota
GGG
Pro
>WENV183599907
OODH01021065
16820
Bacillota
GCT
Ser
>WENV183599993
OODH01034565
152512
Bacillota
CCT
Arg
>WENV183600029
OODH01041522
152459
Bacillota
GTC
Asp
>WENV183599939
OODH01024263
341763
Bacillota
CTC
Glu
>WENV183599806
OODH01009810
44859
Bacillota
AAG
Leu
>WENV183599511
OODH01001244
11034
Bacillota
GGA
Ser
>WENV183599464
OODH01000831
11034
Bacillota
GGA
Ser
>WENV183600033
OODH01041564
342736
Bacillota
TTG
Gln
>WENV183599481
OODH01000948
235079
Bacillota
GAA
Phe
>WENV183599924
OODH01023417
340265
Bacillota
GCC
Gly
>WENV183599930
OODH01023591
149041
Bacillota
GTC
Asp
>WENV183599825
OODH01011308
152513
Bacillota
GAC
Val
>WENV183599719
OODH01004665
245298
Bacillota
CGG
Pro
>WENV183599442
OODH01000661
245298
Bacillota
CGG
Pro
>WENV183599763
OODH01007179
155089
Bacillota
CAT
Met
>WENV183600031
OODH01041522
81644
Bacillota
GAG
Leu
>WENV183600009
OODH01037769
413152
Bacillota
TCC
Gly
>WENV183599973
OODH01030094
144599
Bacillota
GTC
Asp
>WENV183599942
OODH01024871
153911
Bacillota
GAT
Ile
>WENV183599718
OODH01004665
411547
Bacillota
CTG
Gln
>WENV183599714
OODH01004585
411547
Bacillota
CTG
Gln
>WENV183599498
OODH01001068
411547
Bacillota
CTG
Gln
>WENV183599441
OODH01000661
411547
Bacillota
CTG
Gln
>WENV183599764
OODH01007227
411547
Bacillota
CTG
Gln
>WENV183599560
OODH01001669
147684
Bacillota
ACG
Arg
>WENV183599615
OODH01002542
4624
Bacillota
GCT
Ser
>WENV183599927
OODH01023417
248683
Bacillota
TTT
Lys
>WENV183599723
OODH01004816
235095
Bacillota
GGT
Thr
>WENV183599926
OODH01023417
344183
Bacillota
CTG
Gln
>WENV183599929
OODH01023417
239079
Bacillota
TAC
Val
>WENV183599579
OODH01002017
411549
Bacillota
TTG
Gln
>WENV183599551
OODH01001588
411549
Bacillota
TTG
Gln
>WENV183599530
OODH01001434
411549
Bacillota
TTG
Gln
>WENV183600036
OODH01042868
152045
Bacillota
CAT
Met
>WENV183599928
OODH01023417
243398
Bacillota
TTC
Glu
>WENV183599730
OODH01005305
235142
Bacillota
CTT
Lys
>WENV183599828
OODH01011784
148188
Bacillota
CCG
Arg
>WENV183599626
OODH01002711
80612
Bacillota
GTA
Tyr
>WENV183599558
OODH01001626
80612
Bacillota
GTA
Tyr
>WENV183599535
OODH01001462
80612
Bacillota
GTA
Tyr
>WENV183599975
OODH01031614
152051
Bacillota
ACG
Arg
>WENV183599687
OODH01004018
235124
Bacillota
TGG
Pro
>WENV183599547
OODH01001551
235124
Bacillota
TGG
Pro
>WENV183599361
OODH01000344
338129
Bacillota
TGT
Thr
>WENV183599882
OODH01017791
247734
Bacillota
TGC
Ala
>WENV183599620
OODH01002650
235171
Bacillota
CCA
Trp
>WENV183599639
OODH01002995
238974
Bacillota
GAA
Phe
>WENV183599429
OODH01000596
238974
Bacillota
GAA
Phe
>WENV183599497
OODH01001067
144621
Bacillota
GTT
Asn
>WENV183599247
OODH01000056
243098
Bacillota
GGT
Thr
>WENV183599550
OODH01001587
58712
Bacillota
CAG
Leu
>WENV183599359
OODH01000341
58712
Bacillota
CAG
Leu
>WENV183599467
OODH01000837
245296
Bacillota
CCC
Gly
>WENV183599229
OODH01000036
344240
Bacillota
GCC
Gly
>WENV183599515
OODH01001260
144594
Bacillota
CAC
Val
>WENV183599425
OODH01000574
144594
Bacillota
CAC
Val
>WENV183599603
OODH01002437
95563
Bacillota
GTA
Tyr
>WENV183599845
OODH01013672
414486
Bacillota
CCC
Gly
>WENV183599460
OODH01000813
114075
Bacillota
TAG
Leu
>WENV183599788
OODH01008515
238945
Bacillota
GCC
Gly
>WENV183599482
OODH01000948
249259
Bacillota
GCC
Gly
>WENV183599816
OODH01010541
338128
Bacillota
TTC
Glu
>WENV183599652
OODH01003218
338128
Bacillota
TTC
Glu
>WENV183599631
OODH01002761
338128
Bacillota
TTC
Glu
>WENV183599572
OODH01001878
245344
Bacillota
GAA
Phe
>WENV183600019
OODH01038748
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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