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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183633000
OOIG01000002
152149
Bacillota
GTG
His
>WENV183633038
OOIG01000017
248683
Bacillota
TTT
Lys
>WENV183633053
OOIG01000021
307003
Bacillota
TGC
Ala
>WENV183633051
OOIG01000021
243098
Bacillota
GGT
Thr
>WENV183633089
OOIG01000039
339890
Bacillota
TTG
Gln
>WENV183633140
OOIG01000086
155273
Bacillota
CAT
Met
>WENV183633169
OOIG01000106
344240
Bacillota
GCC
Gly
>WENV183633167
OOIG01000106
196632
Bacillota
GTC
Asp
>WENV183633168
OOIG01000106
245344
Bacillota
GAA
Phe
>WENV183633185
OOIG01000115
196632
Bacillota
GTC
Asp
>WENV183633186
OOIG01000115
245344
Bacillota
GAA
Phe
>WENV183633214
OOIG01000159
344240
Bacillota
GCC
Gly
>WENV183633429
OOIG01000554
287000
Bacillota
GTT
Asn
>WENV183633428
OOIG01000554
287000
Bacillota
GTT
Asn
>WENV183633438
OOIG01000590
178024
Bacillota
TCT
Arg
>WENV183633448
OOIG01000609
287000
Bacillota
GTT
Asn
>WENV183633482
OOIG01000747
238974
Bacillota
GAA
Phe
>WENV183633511
OOIG01000816
309417
Bacillota
GGC
Ala
>WENV183633528
OOIG01000894
292519
Bacillota
CAT
Met
>WENV183633554
OOIG01000976
411547
Bacillota
CTG
Gln
>WENV183633558
OOIG01000996
44854
Bacillota
TGA
Ser
>WENV183633559
OOIG01000996
4624
Bacillota
GCT
Ser
>WENV183633561
OOIG01001022
235078
Bacillota
TAC
Val
>WENV183633620
OOIG01001343
256380
Bacillota
>WENV183633644
OOIG01001542
235127
Bacillota
TTT
Lys
>WENV183633657
OOIG01001670
245296
Bacillota
CCC
Gly
>WENV183633670
OOIG01001747
41154
Bacillota
TAA
Leu
>WENV183633691
OOIG01001881
313104
Bacillota
TAC
Val
>WENV183633718
OOIG01002015
338128
Bacillota
TTC
Glu
>WENV183633736
OOIG01002200
144594
Bacillota
CAC
Val
>WENV183633744
OOIG01002230
411549
Bacillota
TTG
Gln
>WENV183633751
OOIG01002299
148188
Bacillota
CCG
Arg
>WENV183633762
OOIG01002370
235078
Bacillota
TAC
Val
>WENV183633780
OOIG01002599
245298
Bacillota
CGG
Pro
>WENV183633779
OOIG01002599
411547
Bacillota
CTG
Gln
>WENV183633801
OOIG01002930
11034
Bacillota
GGA
Ser
>WENV183633827
OOIG01003137
245296
Bacillota
CCC
Gly
>WENV183633829
OOIG01003154
267649
Bacillota
TAC
Val
>WENV183633896
OOIG01003979
196621
Bacillota
GTC
Asp
>WENV183633899
OOIG01003979
235095
Bacillota
GGT
Thr
>WENV183633897
OOIG01003979
235095
Bacillota
GGT
Thr
>WENV183633895
OOIG01003979
235171
Bacillota
CCA
Trp
>WENV183633925
OOIG01004441
144612
Bacillota
TCT
Arg
>WENV183633927
OOIG01004441
58712
Bacillota
CAG
Leu
>WENV183633932
OOIG01004534
309417
Bacillota
GGC
Ala
>WENV183633950
OOIG01004725
309417
Bacillota
GGC
Ala
>WENV183634030
OOIG01006462
235078
Bacillota
TAC
Val
>WENV183634061
OOIG01007707
245298
Bacillota
CGG
Pro
>WENV183634060
OOIG01007707
411547
Bacillota
CTG
Gln
>WENV183634073
OOIG01008069
235124
Bacillota
TGG
Pro
>WENV183634097
OOIG01008638
235098
Bacillota
GAC
Val
>WENV183634114
OOIG01009379
235098
Bacillota
GAC
Val
>WENV183634124
OOIG01009649
338149
Bacillota
CTC
Glu
>WENV183634125
OOIG01009649
144621
Bacillota
GTT
Asn
>WENV183634147
OOIG01010466
338152
Bacillota
TTC
Glu
>WENV183634148
OOIG01010466
412387
Bacillota
GCA
Cys
>WENV183634155
OOIG01010669
80612
Bacillota
GTA
Tyr
>WENV183634154
OOIG01010669
58712
Bacillota
CAG
Leu
>WENV183634160
OOIG01010717
338129
Bacillota
TGT
Thr
>WENV183634255
OOIG01012972
309417
Bacillota
GGC
Ala
>WENV183634301
OOIG01015362
144610
Bacillota
GTG
His
>WENV183634314
OOIG01016311
235124
Bacillota
TGG
Pro
>WENV183634323
OOIG01017040
163943
Bacillota
GTC
Asp
>WENV183634355
OOIG01019120
144577
Bacillota
GAT
Ile
>WENV183634370
OOIG01019945
235078
Bacillota
TAC
Val
>WENV183634379
OOIG01020635
338149
Bacillota
CTC
Glu
>WENV183634380
OOIG01020635
144621
Bacillota
GTT
Asn
>WENV183634385
OOIG01021372
148188
Bacillota
CCG
Arg
>WENV183634393
OOIG01021980
155958
Bacillota
GAT
Ile
>WENV183634409
OOIG01023530
338147
Bacillota
CTC
Glu
>WENV183634427
OOIG01025468
249522
Bacillota
TAC
Val
>WENV183634569
OOIG01054472
235150
Bacillota
TGC
Ala
>WENV183634665
OOIG01083838
238910
Bacillota
CTT
Lys
>WENV183634669
OOIG01085674
162445
Bacillota
CAT
Met
>WENV183634695
OOIG01096988
154711
Bacillota
TGG
Pro
>WENV183634696
OOIG01096988
148144
Bacillota
CAT
Met
>WENV183634694
OOIG01096988
238857
Bacillota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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