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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183642513
OQVN01005852
196621
Bacillota
GTC
Asp
>WENV183642539
OQVN01007123
155958
Bacillota
GAT
Ile
>WENV183642095
OQVN01000002
352996
Bacillota
TTC
Glu
>WENV183642666
OQVN01017163
235134
Bacillota
GAA
Phe
>WENV183642580
OQVN01010257
148239
Bacillota
TCT
Arg
>WENV183642689
OQVN01019805
44854
Bacillota
TGA
Ser
>WENV183642405
OQVN01002312
144577
Bacillota
GAT
Ile
>WENV183642185
OQVN01000168
37071
Bacillota
TGA
Ser
>WENV183642365
OQVN01001780
429443
Bacillota
GCA
Cys
>WENV183642214
OQVN01000310
59312
Bacillota
CAG
Leu
>WENV183642823
OQVN01039573
238910
Bacillota
CTT
Lys
>WENV183642243
OQVN01000607
338147
Bacillota
CTC
Glu
>WENV183642149
OQVN01000075
338147
Bacillota
CTC
Glu
>WENV183642121
OQVN01000019
338147
Bacillota
CTC
Glu
>WENV183642157
OQVN01000092
235114
Bacillota
TTT
Lys
>WENV183642255
OQVN01000764
44859
Bacillota
AAG
Leu
>WENV183642213
OQVN01000310
44859
Bacillota
AAG
Leu
>WENV183642512
OQVN01005852
235117
Bacillota
TAC
Val
>WENV183642581
OQVN01010257
156937
Bacillota
GTG
His
>WENV183642510
OQVN01005852
235079
Bacillota
GAA
Phe
>WENV183642312
OQVN01001424
295714
Bacillota
GCC
Gly
>WENV183642502
OQVN01005531
16266
Bacillota
GCT
Ser
>WENV183642404
OQVN01002312
235087
Bacillota
TGC
Ala
>WENV183642560
OQVN01008448
173314
Bacillota
GAT
Ile
>WENV183642815
OQVN01038061
338149
Bacillota
CTC
Glu
>WENV183642682
OQVN01018581
37269
Bacillota
TGA
Ser
>WENV183642618
OQVN01012898
287000
Bacillota
GTT
Asn
>WENV183642667
OQVN01017163
240017
Bacillota
GCC
Gly
>WENV183642553
OQVN01008059
411547
Bacillota
CTG
Gln
>WENV183642464
OQVN01003924
147684
Bacillota
ACG
Arg
>WENV183642690
OQVN01019805
4624
Bacillota
GCT
Ser
>WENV183642514
OQVN01005852
235095
Bacillota
GGT
Thr
>WENV183642507
OQVN01005683
241471
Bacillota
TGC
Ala
>WENV183642384
OQVN01002236
419639
Bacillota
GCA
Cys
>WENV183642283
OQVN01001028
245386
Bacillota
CCA
Trp
>WENV183642548
OQVN01007478
80612
Bacillota
GTA
Tyr
>WENV183642612
OQVN01012351
256380
Bacillota
>WENV183642328
OQVN01001477
157838
Bacillota
GTC
Asp
>WENV183642495
OQVN01005110
236037
Bacillota
GTG
His
>WENV183642613
OQVN01012634
247734
Bacillota
TGC
Ala
>WENV183642778
OQVN01031004
127572
Bacillota
ACG
Arg
>WENV183642617
OQVN01012895
238974
Bacillota
GAA
Phe
>WENV183642156
OQVN01000092
235113
Bacillota
GAA
Phe
>WENV183642438
OQVN01003185
243098
Bacillota
GGT
Thr
>WENV183642446
OQVN01003345
58712
Bacillota
CAG
Leu
>WENV183642816
OQVN01038061
272992
Bacillota
CTT
Lys
>WENV183642383
OQVN01002236
344240
Bacillota
GCC
Gly
>WENV183642390
OQVN01002251
196632
Bacillota
GTC
Asp
>WENV183642559
OQVN01008448
299139
Bacillota
TGC
Ala
>WENV183642410
OQVN01002533
95563
Bacillota
GTA
Tyr
>WENV183642391
OQVN01002251
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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