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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
164 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183705110
PDWI01001047
423320
Bacillota
>WENV183705979
PDWI01002811
423320
Bacillota
>WENV183706296
PDWI01003688
423320
Bacillota
>WENV183706757
PDWI01005437
423320
Bacillota
>WENV183707115
PDWI01006816
423320
Bacillota
>WENV183708126
PDWI01013235
423320
Bacillota
>WENV183710752
PDWI01052889
423320
Bacillota
>WENV183711534
PDWI01072258
423320
Bacillota
>WENV183714366
PDWI01179971
423320
Bacillota
>WENV183716382
PDWI01305076
423320
Bacillota
>WENV183711954
PDWI01084453
283203
Bacillota
>WENV183713703
PDWI01149719
197127
Bacillota
CAT
Met
>WENV183713473
PDWI01139677
307633
Bacillota
CAT
Met
>WENV183705169
PDWI01001171
284869
Bacillota
CCA
Trp
>WENV183706650
PDWI01005015
284869
Bacillota
CCA
Trp
>WENV183706975
PDWI01006173
284869
Bacillota
CCA
Trp
>WENV183707925
PDWI01011545
284869
Bacillota
CCA
Trp
>WENV183709741
PDWI01033031
284869
Bacillota
CCA
Trp
>WENV183711549
PDWI01072636
284869
Bacillota
CCA
Trp
>WENV183713430
PDWI01138236
284869
Bacillota
CCA
Trp
>WENV183714308
PDWI01177387
284869
Bacillota
CCA
Trp
>WENV183716205
PDWI01293674
284869
Bacillota
CCA
Trp
>WENV183708093
PDWI01012862
327695
Bacillota
GAA
Phe
>WENV183709717
PDWI01032371
327695
Bacillota
GAA
Phe
>WENV183709931
PDWI01036587
327695
Bacillota
GAA
Phe
>WENV183710297
PDWI01043718
327695
Bacillota
GAA
Phe
>WENV183711638
PDWI01074921
327695
Bacillota
GAA
Phe
>WENV183712148
PDWI01090435
327695
Bacillota
GAA
Phe
>WENV183712338
PDWI01096525
327695
Bacillota
GAA
Phe
>WENV183713520
PDWI01141337
327695
Bacillota
GAA
Phe
>WENV183714014
PDWI01163795
327695
Bacillota
GAA
Phe
>WENV183715448
PDWI01241308
327695
Bacillota
GAA
Phe
>WENV183709882
PDWI01035768
179563
Bacillota
GAT
Ile
>WENV183713203
PDWI01128955
480469
Bacillota
GCA
Cys
>WENV183713287
PDWI01132555
480469
Bacillota
GCA
Cys
>WENV183713504
PDWI01141139
480469
Bacillota
GCA
Cys
>WENV183714954
PDWI01213422
480469
Bacillota
GCA
Cys
>WENV183705248
PDWI01001267
480469
Bacillota
GCA
Cys
>WENV183705850
PDWI01002414
480469
Bacillota
GCA
Cys
>WENV183706099
PDWI01003093
480469
Bacillota
GCA
Cys
>WENV183706847
PDWI01005719
480469
Bacillota
GCA
Cys
>WENV183706848
PDWI01005727
480469
Bacillota
GCA
Cys
>WENV183707762
PDWI01010491
480469
Bacillota
GCA
Cys
>WENV183707970
PDWI01011888
480469
Bacillota
GCA
Cys
>WENV183711770
PDWI01079863
480469
Bacillota
GCA
Cys
>WENV183711918
PDWI01083801
480469
Bacillota
GCA
Cys
>WENV183712125
PDWI01089939
480469
Bacillota
GCA
Cys
>WENV183712333
PDWI01096278
480469
Bacillota
GCA
Cys
>WENV183709503
PDWI01029180
424916
Bacillota
GCC
Gly
>WENV183705098
PDWI01001019
399246
Bacillota
GCC
Gly
>WENV183705998
PDWI01002862
399246
Bacillota
GCC
Gly
>WENV183706372
PDWI01003968
399246
Bacillota
GCC
Gly
>WENV183706520
PDWI01004545
399246
Bacillota
GCC
Gly
>WENV183706522
PDWI01004545
399246
Bacillota
GCC
Gly
>WENV183706765
PDWI01005437
399246
Bacillota
GCC
Gly
>WENV183706782
PDWI01005478
399246
Bacillota
GCC
Gly
>WENV183706845
PDWI01005719
399246
Bacillota
GCC
Gly
>WENV183707064
PDWI01006561
399246
Bacillota
GCC
Gly
>WENV183707099
PDWI01006686
399246
Bacillota
GCC
Gly
>WENV183707303
PDWI01007801
399246
Bacillota
GCC
Gly
>WENV183707431
PDWI01008381
399246
Bacillota
GCC
Gly
>WENV183707743
PDWI01010359
399246
Bacillota
GCC
Gly
>WENV183707783
PDWI01010633
399246
Bacillota
GCC
Gly
>WENV183708212
PDWI01013901
399246
Bacillota
GCC
Gly
>WENV183708215
PDWI01013901
399246
Bacillota
GCC
Gly
>WENV183708235
PDWI01014043
399246
Bacillota
GCC
Gly
>WENV183708479
PDWI01016585
399246
Bacillota
GCC
Gly
>WENV183708690
PDWI01018821
399246
Bacillota
GCC
Gly
>WENV183710471
PDWI01047299
399246
Bacillota
GCC
Gly
>WENV183710486
PDWI01047504
399246
Bacillota
GCC
Gly
>WENV183711027
PDWI01059227
399246
Bacillota
GCC
Gly
>WENV183711768
PDWI01079863
399246
Bacillota
GCC
Gly
>WENV183711769
PDWI01079863
399246
Bacillota
GCC
Gly
>WENV183711803
PDWI01081014
399246
Bacillota
GCC
Gly
>WENV183713033
PDWI01122223
399246
Bacillota
GCC
Gly
>WENV183713108
PDWI01124611
399246
Bacillota
GCC
Gly
>WENV183713202
PDWI01128955
399246
Bacillota
GCC
Gly
>WENV183713300
PDWI01133259
399246
Bacillota
GCC
Gly
>WENV183713450
PDWI01138982
399246
Bacillota
GCC
Gly
>WENV183714382
PDWI01181020
399246
Bacillota
GCC
Gly
>WENV183705423
PDWI01001534
25413
Bacillota
GCT
Ser
>WENV183713968
PDWI01161735
21311
Bacillota
GCT
Ser
>WENV183712985
PDWI01120707
21311
Bacillota
GCT
Ser
>WENV183715412
PDWI01239411
120213
Bacillota
GTA
Tyr
>WENV183707901
PDWI01011340
210775
Bacillota
GTC
Asp
>WENV183716016
PDWI01280000
210775
Bacillota
GTC
Asp
>WENV183707273
PDWI01007723
235661
Bacillota
GTC
Asp
>WENV183707410
PDWI01008303
235661
Bacillota
GTC
Asp
>WENV183710705
PDWI01052119
175915
Bacillota
GTC
Asp
>WENV183712625
PDWI01107571
175915
Bacillota
GTC
Asp
>WENV183714503
PDWI01187742
175915
Bacillota
GTC
Asp
>WENV183714855
PDWI01206692
175915
Bacillota
GTC
Asp
>WENV183714982
PDWI01214502
175915
Bacillota
GTC
Asp
>WENV183715813
PDWI01264396
175915
Bacillota
GTC
Asp
>WENV183712993
PDWI01121046
298260
Bacillota
GTT
Asn
>WENV183713322
PDWI01134174
46835
Bacillota
TAA
Leu
>WENV183714983
PDWI01214502
335164
Bacillota
TAC
Val
>WENV183715814
PDWI01264396
335164
Bacillota
TAC
Val
>WENV183704898
PDWI01000747
335164
Bacillota
TAC
Val
>WENV183706651
PDWI01005015
335164
Bacillota
TAC
Val
>WENV183707902
PDWI01011340
335164
Bacillota
TAC
Val
>WENV183707991
PDWI01012092
335164
Bacillota
TAC
Val
>WENV183710706
PDWI01052119
335164
Bacillota
TAC
Val
>WENV183713065
PDWI01123025
335164
Bacillota
TAC
Val
>WENV183714504
PDWI01187742
335164
Bacillota
TAC
Val
>WENV183714856
PDWI01206692
335164
Bacillota
TAC
Val
>WENV183710443
PDWI01046789
317820
Bacillota
TAC
Val
>WENV183710717
PDWI01052187
140812
Bacillota
TAG
Leu
>WENV183707271
PDWI01007722
482441
Bacillota
TCC
Gly
>WENV183710189
PDWI01041406
482441
Bacillota
TCC
Gly
>WENV183711286
PDWI01065233
46655
Bacillota
TGA
Ser
>WENV183715516
PDWI01245213
46655
Bacillota
TGA
Ser
>WENV183716173
PDWI01291866
314834
Bacillota
TGC
Ala
>WENV183716290
PDWI01299511
314834
Bacillota
TGC
Ala
>WENV183707880
PDWI01011254
227487
Bacillota
TGG
Pro
>WENV183707885
PDWI01011283
227487
Bacillota
TGG
Pro
>WENV183708081
PDWI01012827
227487
Bacillota
TGG
Pro
>WENV183708909
PDWI01021283
227487
Bacillota
TGG
Pro
>WENV183709705
PDWI01032303
227487
Bacillota
TGG
Pro
>WENV183709784
PDWI01034019
227487
Bacillota
TGG
Pro
>WENV183710373
PDWI01045184
227487
Bacillota
TGG
Pro
>WENV183711563
PDWI01073080
227487
Bacillota
TGG
Pro
>WENV183711661
PDWI01075675
227487
Bacillota
TGG
Pro
>WENV183712851
PDWI01116240
227487
Bacillota
TGG
Pro
>WENV183713153
PDWI01126985
227487
Bacillota
TGG
Pro
>WENV183713630
PDWI01146066
227487
Bacillota
TGG
Pro
>WENV183714269
PDWI01175699
227487
Bacillota
TGG
Pro
>WENV183714537
PDWI01189595
227487
Bacillota
TGG
Pro
>WENV183714692
PDWI01198114
227487
Bacillota
TGG
Pro
>WENV183714838
PDWI01206104
227487
Bacillota
TGG
Pro
>WENV183715070
PDWI01219963
227487
Bacillota
TGG
Pro
>WENV183715432
PDWI01240228
227487
Bacillota
TGG
Pro
>WENV183715655
PDWI01253560
227487
Bacillota
TGG
Pro
>WENV183715992
PDWI01278740
227487
Bacillota
TGG
Pro
>WENV183716095
PDWI01286174
227487
Bacillota
TGG
Pro
>WENV183716109
PDWI01286900
227487
Bacillota
TGG
Pro
>WENV183704514
PDWI01000327
227487
Bacillota
TGG
Pro
>WENV183704709
PDWI01000535
227487
Bacillota
TGG
Pro
>WENV183704841
PDWI01000684
227487
Bacillota
TGG
Pro
>WENV183705426
PDWI01001534
227487
Bacillota
TGG
Pro
>WENV183705848
PDWI01002409
227487
Bacillota
TGG
Pro
>WENV183706063
PDWI01003018
227487
Bacillota
TGG
Pro
>WENV183706107
PDWI01003107
227487
Bacillota
TGG
Pro
>WENV183706453
PDWI01004295
227487
Bacillota
TGG
Pro
>WENV183706570
PDWI01004723
227487
Bacillota
TGG
Pro
>WENV183706929
PDWI01005986
227487
Bacillota
TGG
Pro
>WENV183707175
PDWI01007151
227487
Bacillota
TGG
Pro
>WENV183707869
PDWI01011205
227487
Bacillota
TGG
Pro
>WENV183708426
PDWI01015998
407840
Bacillota
TTC
Glu
>WENV183712355
PDWI01097057
407840
Bacillota
TTC
Glu
>WENV183711506
PDWI01071597
430720
Bacillota
TTC
Glu
>WENV183716203
PDWI01293595
430720
Bacillota
TTC
Glu
>WENV183713034
PDWI01122223
280643
Bacillota
TTT
Lys
>WENV183714542
PDWI01189595
280643
Bacillota
TTT
Lys
>WENV183704714
PDWI01000535
280643
Bacillota
TTT
Lys
>WENV183705099
PDWI01001019
280643
Bacillota
TTT
Lys
>WENV183705813
PDWI01002325
280643
Bacillota
TTT
Lys
>WENV183706575
PDWI01004723
280643
Bacillota
TTT
Lys
>WENV183706846
PDWI01005719
280643
Bacillota
TTT
Lys
>WENV183707100
PDWI01006686
280643
Bacillota
TTT
Lys
>WENV183707203
PDWI01007263
280643
Bacillota
TTT
Lys
>WENV183707227
PDWI01007479
280643
Bacillota
TTT
Lys
>WENV183707874
PDWI01011205
280643
Bacillota
TTT
Lys
>WENV183710472
PDWI01047299
280643
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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