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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183533101
OOAE01000001
425638
Bacteroidota
CTG
Gln
>WENV183533103
OOAE01000002
185921
Bacteroidota
GTC
Asp
>WENV183533140
OOAE01000017
50727
Bacteroidota
TGA
Ser
>WENV183533141
OOAE01000019
239647
Bacteroidota
TTT
Lys
>WENV183533158
OOAE01000029
353927
Bacteroidota
TTC
Glu
>WENV183533170
OOAE01000042
280469
Bacteroidota
CGT
Thr
>WENV183533179
OOAE01000055
80835
Bacteroidota
GTA
Tyr
>WENV183533182
OOAE01000055
154643
Bacteroidota
CAT
Met
>WENV183533184
OOAE01000061
95559
Bacteroidota
TAG
Leu
>WENV183533192
OOAE01000076
239647
Bacteroidota
TTT
Lys
>WENV183533193
OOAE01000079
144656
Bacteroidota
GTG
His
>WENV183533194
OOAE01000079
16224
Bacteroidota
GGA
Ser
>WENV183533195
OOAE01000080
344769
Bacteroidota
CTC
Glu
>WENV183533196
OOAE01000080
344769
Bacteroidota
CTC
Glu
>WENV183533204
OOAE01000085
132360
Bacteroidota
GGG
Pro
>WENV183533206
OOAE01000093
80607
Bacteroidota
GTA
Tyr
>WENV183533251
OOAE01000173
235207
Bacteroidota
CAT
Met
>WENV183533264
OOAE01000186
414426
Bacteroidota
CTG
Gln
>WENV183533266
OOAE01000189
80607
Bacteroidota
GTA
Tyr
>WENV183533267
OOAE01000190
411629
Bacteroidota
TTG
Gln
>WENV183533277
OOAE01000203
235207
Bacteroidota
CAT
Met
>WENV183533322
OOAE01000257
126641
Bacteroidota
TAC
Val
>WENV183533347
OOAE01000295
338124
Bacteroidota
CCG
Arg
>WENV183533369
OOAE01000359
132360
Bacteroidota
GGG
Pro
>WENV183533382
OOAE01000388
37076
Bacteroidota
TAA
Leu
>WENV183533387
OOAE01000412
338132
Bacteroidota
GCA
Cys
>WENV183533412
OOAE01000462
243025
Bacteroidota
CAT
Met
>WENV183533426
OOAE01000502
237796
Bacteroidota
CGT
Thr
>WENV183533433
OOAE01000522
235097
Bacteroidota
TTT
Lys
>WENV183533435
OOAE01000532
419272
Bacteroidota
CTG
Gln
>WENV183533440
OOAE01000543
425638
Bacteroidota
CTG
Gln
>WENV183533445
OOAE01000551
339412
Bacteroidota
GGT
Thr
>WENV183533450
OOAE01000560
338132
Bacteroidota
GCA
Cys
>WENV183533453
OOAE01000562
338125
Bacteroidota
CCT
Arg
>WENV183533461
OOAE01000602
144655
Bacteroidota
GGC
Ala
>WENV183533600
OOAE01001028
238810
Bacteroidota
CGG
Pro
>WENV183533611
OOAE01001093
338155
Bacteroidota
CTC
Glu
>WENV183533651
OOAE01001240
415558
Bacteroidota
TTG
Gln
>WENV183533695
OOAE01001441
17323
Bacteroidota
GGA
Ser
>WENV183533748
OOAE01001943
128251
Bacteroidota
TGG
Pro
>WENV183533753
OOAE01002053
154643
Bacteroidota
CAT
Met
>WENV183533774
OOAE01002200
338132
Bacteroidota
GCA
Cys
>WENV183533787
OOAE01002272
235097
Bacteroidota
TTT
Lys
>WENV183533792
OOAE01002360
95987
Bacteroidota
CAA
Leu
>WENV183533814
OOAE01002581
263771
Bacteroidota
CTT
Lys
>WENV183533816
OOAE01002600
235097
Bacteroidota
TTT
Lys
>WENV183533825
OOAE01002788
338125
Bacteroidota
CCT
Arg
>WENV183533849
OOAE01003143
344692
Bacteroidota
GGT
Thr
>WENV183533852
OOAE01003198
341950
Bacteroidota
>WENV183533862
OOAE01003326
16220
Bacteroidota
GGA
Ser
>WENV183533935
OOAE01004361
46165
Bacteroidota
TGA
Ser
>WENV183533949
OOAE01004652
235129
Bacteroidota
GCC
Gly
>WENV183533974
OOAE01005132
155123
Bacteroidota
GTT
Asn
>WENV183533977
OOAE01005221
415410
Bacteroidota
TTG
Gln
>WENV183533980
OOAE01005296
126966
Bacteroidota
TAC
Val
>WENV183533981
OOAE01005296
126966
Bacteroidota
TAC
Val
>WENV183534003
OOAE01006043
58714
Bacteroidota
CAA
Leu
>WENV183534012
OOAE01006516
144657
Bacteroidota
CGG
Pro
>WENV183534032
OOAE01007600
95875
Bacteroidota
TAG
Leu
>WENV183534039
OOAE01008048
171336
Bacteroidota
GGC
Ala
>WENV183534057
OOAE01009075
353927
Bacteroidota
TTC
Glu
>WENV183534070
OOAE01009749
59689
Bacteroidota
CAG
Leu
>WENV183534103
OOAE01012763
144639
Bacteroidota
GGC
Ala
>WENV183534129
OOAE01015274
155123
Bacteroidota
GTT
Asn
>WENV183534144
OOAE01015963
147439
Bacteroidota
TCT
Arg
>WENV183534149
OOAE01017063
338486
Bacteroidota
CAT
Met
>WENV183534159
OOAE01018061
235102
Bacteroidota
CGT
Thr
>WENV183534194
OOAE01023727
150485
Bacteroidota
GTT
Asn
>WENV183534237
OOAE01033977
240012
Bacteroidota
CCC
Gly
>WENV183534270
OOAE01042509
238121
Bacteroidota
CTT
Lys
>WENV183534278
OOAE01044524
80614
Bacteroidota
>WENV183534289
OOAE01047344
23696
Bacteroidota
GCT
Ser
>WENV183534352
OOAE01069835
146530
Bacteroidota
TGT
Thr
>WENV183534358
OOAE01072449
235165
Bacteroidota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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