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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183539130
OOAI01000397
95987
Bacteroidota
CAA
Leu
>WENV183539096
OOAI01000297
339412
Bacteroidota
GGT
Thr
>WENV183539150
OOAI01000463
235102
Bacteroidota
CGT
Thr
>WENV183539262
OOAI01001014
97336
Bacteroidota
CAG
Leu
>WENV183539165
OOAI01000503
338155
Bacteroidota
CTC
Glu
>WENV183539226
OOAI01000771
95618
Bacteroidota
TAG
Leu
>WENV183539080
OOAI01000269
413663
Bacteroidota
CTG
Gln
>WENV183539079
OOAI01000269
413663
Bacteroidota
CTG
Gln
>WENV183539232
OOAI01000811
415410
Bacteroidota
TTG
Gln
>WENV183538952
OOAI01000107
136244
Bacteroidota
TAC
Val
>WENV183538951
OOAI01000107
136244
Bacteroidota
TAC
Val
>WENV183538867
OOAI01000026
411543
Bacteroidota
CTG
Gln
>WENV183539097
OOAI01000297
237797
Bacteroidota
CCA
Trp
>WENV183538895
OOAI01000047
412479
Bacteroidota
TTG
Gln
>WENV183538790
OOAI01000003
147147
Bacteroidota
GTG
His
>WENV183538789
OOAI01000003
147147
Bacteroidota
GTG
His
>WENV183539128
OOAI01000382
235182
Bacteroidota
>WENV183539125
OOAI01000377
272983
Bacteroidota
CGT
Thr
>WENV183539117
OOAI01000341
338124
Bacteroidota
CCG
Arg
>WENV183539317
OOAI01001946
338132
Bacteroidota
GCA
Cys
>WENV183539151
OOAI01000470
144688
Bacteroidota
CAT
Met
>WENV183539212
OOAI01000702
193809
Bacteroidota
CAT
Met
>WENV183538886
OOAI01000043
37076
Bacteroidota
TAA
Leu
>WENV183538874
OOAI01000033
181746
Bacteroidota
GGC
Ala
>WENV183539051
OOAI01000228
301449
Bacteroidota
CGG
Pro
>WENV183539181
OOAI01000567
144933
Bacteroidota
TCT
Arg
>WENV183539346
OOAI01003470
144656
Bacteroidota
GTG
His
>WENV183539093
OOAI01000294
235207
Bacteroidota
CAT
Met
>WENV183539014
OOAI01000170
235207
Bacteroidota
CAT
Met
>WENV183539237
OOAI01000817
80607
Bacteroidota
GTA
Tyr
>WENV183539070
OOAI01000260
80607
Bacteroidota
GTA
Tyr
>WENV183538942
OOAI01000096
80607
Bacteroidota
GTA
Tyr
>WENV183539239
OOAI01000823
113604
Bacteroidota
>WENV183538834
OOAI01000019
344769
Bacteroidota
CTC
Glu
>WENV183538833
OOAI01000019
344769
Bacteroidota
CTC
Glu
>WENV183539303
OOAI01001670
52358
Bacteroidota
TGA
Ser
>WENV183539297
OOAI01001569
52358
Bacteroidota
TGA
Ser
>WENV183539013
OOAI01000169
52358
Bacteroidota
TGA
Ser
>WENV183539345
OOAI01003410
175704
Bacteroidota
TGC
Ala
>WENV183539235
OOAI01000817
144590
Bacteroidota
GTT
Asn
>WENV183539017
OOAI01000172
95559
Bacteroidota
TAG
Leu
>WENV183539192
OOAI01000610
419272
Bacteroidota
CTG
Gln
>WENV183539253
OOAI01000948
144655
Bacteroidota
GGC
Ala
>WENV183538831
OOAI01000018
338314
Bacteroidota
CCT
Arg
>WENV183539035
OOAI01000211
44852
Bacteroidota
TAA
Leu
>WENV183538840
OOAI01000019
196394
Bacteroidota
GTC
Asp
>WENV183538839
OOAI01000019
196394
Bacteroidota
GTC
Asp
>WENV183539363
OOAI01004914
132360
Bacteroidota
GGG
Pro
>WENV183538866
OOAI01000026
132360
Bacteroidota
GGG
Pro
>WENV183538820
OOAI01000008
19317
Bacteroidota
GGA
Ser
>WENV183539137
OOAI01000412
139062
Bacteroidota
TGG
Pro
>WENV183539225
OOAI01000768
16224
Bacteroidota
GGA
Ser
>WENV183539129
OOAI01000389
16220
Bacteroidota
GGA
Ser
>WENV183539166
OOAI01000512
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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