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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183547516
OOAW01000001
411629
Bacteroidota
TTG
Gln
>WENV183547521
OOAW01000001
95618
Bacteroidota
TAG
Leu
>WENV183547523
OOAW01000002
235129
Bacteroidota
GCC
Gly
>WENV183547524
OOAW01000002
59689
Bacteroidota
CAG
Leu
>WENV183547525
OOAW01000002
58715
Bacteroidota
GAG
Leu
>WENV183547527
OOAW01000002
80614
Bacteroidota
>WENV183547545
OOAW01000004
23696
Bacteroidota
GCT
Ser
>WENV183547546
OOAW01000004
185921
Bacteroidota
GTC
Asp
>WENV183547547
OOAW01000004
185921
Bacteroidota
GTC
Asp
>WENV183547548
OOAW01000004
411550
Bacteroidota
CTG
Gln
>WENV183547549
OOAW01000004
411550
Bacteroidota
CTG
Gln
>WENV183547550
OOAW01000004
338132
Bacteroidota
GCA
Cys
>WENV183547553
OOAW01000005
144933
Bacteroidota
TCT
Arg
>WENV183547568
OOAW01000010
132360
Bacteroidota
GGG
Pro
>WENV183547569
OOAW01000010
235097
Bacteroidota
TTT
Lys
>WENV183547570
OOAW01000010
419272
Bacteroidota
CTG
Gln
>WENV183547571
OOAW01000010
16220
Bacteroidota
GGA
Ser
>WENV183547573
OOAW01000011
338132
Bacteroidota
GCA
Cys
>WENV183547583
OOAW01000015
338486
Bacteroidota
CAT
Met
>WENV183547588
OOAW01000019
235129
Bacteroidota
GCC
Gly
>WENV183547590
OOAW01000019
235129
Bacteroidota
GCC
Gly
>WENV183547594
OOAW01000019
338164
Bacteroidota
TTC
Glu
>WENV183547595
OOAW01000019
338164
Bacteroidota
TTC
Glu
>WENV183547596
OOAW01000019
343138
Bacteroidota
CCT
Arg
>WENV183547628
OOAW01000026
235207
Bacteroidota
CAT
Met
>WENV183547629
OOAW01000026
235207
Bacteroidota
CAT
Met
>WENV183547631
OOAW01000027
338125
Bacteroidota
CCT
Arg
>WENV183547653
OOAW01000036
338314
Bacteroidota
CCT
Arg
>WENV183547654
OOAW01000036
144688
Bacteroidota
CAT
Met
>WENV183547655
OOAW01000037
147439
Bacteroidota
TCT
Arg
>WENV183547656
OOAW01000037
240012
Bacteroidota
CCC
Gly
>WENV183547657
OOAW01000038
238121
Bacteroidota
CTT
Lys
>WENV183547658
OOAW01000038
238121
Bacteroidota
CTT
Lys
>WENV183547659
OOAW01000038
45423
Bacteroidota
TGA
Ser
>WENV183547660
OOAW01000038
50727
Bacteroidota
TGA
Ser
>WENV183547679
OOAW01000049
411543
Bacteroidota
CTG
Gln
>WENV183547680
OOAW01000049
132360
Bacteroidota
GGG
Pro
>WENV183547682
OOAW01000051
235203
Bacteroidota
TTT
Lys
>WENV183547684
OOAW01000053
44852
Bacteroidota
TAA
Leu
>WENV183547685
OOAW01000054
181746
Bacteroidota
GGC
Ala
>WENV183547705
OOAW01000063
144659
Bacteroidota
GTG
His
>WENV183547706
OOAW01000063
144659
Bacteroidota
GTG
His
>WENV183547707
OOAW01000063
80614
Bacteroidota
>WENV183547709
OOAW01000064
80607
Bacteroidota
GTA
Tyr
>WENV183547711
OOAW01000065
235207
Bacteroidota
CAT
Met
>WENV183547718
OOAW01000068
338486
Bacteroidota
CAT
Met
>WENV183547726
OOAW01000071
338124
Bacteroidota
CCG
Arg
>WENV183547741
OOAW01000081
58714
Bacteroidota
CAA
Leu
>WENV183547742
OOAW01000081
235203
Bacteroidota
TTT
Lys
>WENV183547753
OOAW01000089
95875
Bacteroidota
TAG
Leu
>WENV183547756
OOAW01000093
338155
Bacteroidota
CTC
Glu
>WENV183547760
OOAW01000095
59689
Bacteroidota
CAG
Leu
>WENV183547787
OOAW01000115
235182
Bacteroidota
>WENV183547789
OOAW01000117
50727
Bacteroidota
TGA
Ser
>WENV183547805
OOAW01000137
95559
Bacteroidota
TAG
Leu
>WENV183547825
OOAW01000149
338132
Bacteroidota
GCA
Cys
>WENV183547852
OOAW01000186
415410
Bacteroidota
TTG
Gln
>WENV183547853
OOAW01000188
50727
Bacteroidota
TGA
Ser
>WENV183547873
OOAW01000223
44852
Bacteroidota
TAA
Leu
>WENV183547874
OOAW01000223
144590
Bacteroidota
GTT
Asn
>WENV183547875
OOAW01000223
144590
Bacteroidota
GTT
Asn
>WENV183547880
OOAW01000234
144656
Bacteroidota
GTG
His
>WENV183547924
OOAW01000292
150485
Bacteroidota
GTT
Asn
>WENV183547925
OOAW01000292
150485
Bacteroidota
GTT
Asn
>WENV183547932
OOAW01000324
338132
Bacteroidota
GCA
Cys
>WENV183547933
OOAW01000324
338132
Bacteroidota
GCA
Cys
>WENV183547939
OOAW01000333
132360
Bacteroidota
GGG
Pro
>WENV183547947
OOAW01000350
144657
Bacteroidota
CGG
Pro
>WENV183547948
OOAW01000350
235180
Bacteroidota
CCA
Trp
>WENV183547969
OOAW01000446
80614
Bacteroidota
>WENV183547971
OOAW01000449
272983
Bacteroidota
CGT
Thr
>WENV183547981
OOAW01000477
425638
Bacteroidota
CTG
Gln
>WENV183548001
OOAW01000518
80607
Bacteroidota
GTA
Tyr
>WENV183548030
OOAW01000677
50727
Bacteroidota
TGA
Ser
>WENV183548066
OOAW01000816
425638
Bacteroidota
CTG
Gln
>WENV183548100
OOAW01001112
144596
Bacteroidota
GGC
Ala
>WENV183548110
OOAW01001206
132360
Bacteroidota
GGG
Pro
>WENV183548125
OOAW01001376
50727
Bacteroidota
TGA
Ser
>WENV183548139
OOAW01001522
235102
Bacteroidota
CGT
Thr
>WENV183548190
OOAW01002081
80607
Bacteroidota
GTA
Tyr
>WENV183548191
OOAW01002081
338165
Bacteroidota
GGT
Thr
>WENV183548227
OOAW01002429
338125
Bacteroidota
CCT
Arg
>WENV183548236
OOAW01002535
50727
Bacteroidota
TGA
Ser
>WENV183548253
OOAW01002796
50727
Bacteroidota
TGA
Ser
>WENV183548257
OOAW01002875
415410
Bacteroidota
TTG
Gln
>WENV183548272
OOAW01003209
338132
Bacteroidota
GCA
Cys
>WENV183548317
OOAW01004837
144655
Bacteroidota
GGC
Ala
>WENV183548340
OOAW01006584
19528
Bacteroidota
GGA
Ser
>WENV183548449
OOAW01020075
23696
Bacteroidota
GCT
Ser
>WENV183548450
OOAW01020075
338155
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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