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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183550648
OOBI01000004
235097
Bacteroidota
TTT
Lys
>WENV183550699
OOBI01000024
235097
Bacteroidota
TTT
Lys
>WENV183551564
OOBI01037826
235102
Bacteroidota
CGT
Thr
>WENV183551316
OOBI01003057
338155
Bacteroidota
CTC
Glu
>WENV183551240
OOBI01001509
343138
Bacteroidota
CCT
Arg
>WENV183550825
OOBI01000099
95618
Bacteroidota
TAG
Leu
>WENV183551450
OOBI01012128
338486
Bacteroidota
CAT
Met
>WENV183550903
OOBI01000187
411543
Bacteroidota
CTG
Gln
>WENV183551358
OOBI01004378
436206
Bacteroidota
TTG
Gln
>WENV183550852
OOBI01000127
436206
Bacteroidota
TTG
Gln
>WENV183551504
OOBI01021700
20893
Bacteroidota
GGA
Ser
>WENV183550824
OOBI01000098
235182
Bacteroidota
>WENV183550689
OOBI01000015
338124
Bacteroidota
CCG
Arg
>WENV183551256
OOBI01001759
338132
Bacteroidota
GCA
Cys
>WENV183550877
OOBI01000160
338132
Bacteroidota
GCA
Cys
>WENV183550645
OOBI01000004
338132
Bacteroidota
GCA
Cys
>WENV183550937
OOBI01000235
144688
Bacteroidota
CAT
Met
>WENV183550770
OOBI01000050
193809
Bacteroidota
CAT
Met
>WENV183550879
OOBI01000163
181746
Bacteroidota
GGC
Ala
>WENV183551295
OOBI01002579
301449
Bacteroidota
CGG
Pro
>WENV183551231
OOBI01001443
301449
Bacteroidota
CGG
Pro
>WENV183550720
OOBI01000026
301449
Bacteroidota
CGG
Pro
>WENV183551186
OOBI01001120
144933
Bacteroidota
TCT
Arg
>WENV183550755
OOBI01000040
144656
Bacteroidota
GTG
His
>WENV183550988
OOBI01000330
235207
Bacteroidota
CAT
Met
>WENV183550894
OOBI01000171
235207
Bacteroidota
CAT
Met
>WENV183551259
OOBI01001795
144596
Bacteroidota
GGC
Ala
>WENV183550839
OOBI01000117
80607
Bacteroidota
GTA
Tyr
>WENV183551045
OOBI01000495
16999
Bacteroidota
GGA
Ser
>WENV183550813
OOBI01000084
16999
Bacteroidota
GGA
Ser
>WENV183550696
OOBI01000021
144590
Bacteroidota
GTT
Asn
>WENV183551115
OOBI01000705
95559
Bacteroidota
TAG
Leu
>WENV183550957
OOBI01000278
144655
Bacteroidota
GGC
Ala
>WENV183551562
OOBI01037347
338164
Bacteroidota
TTC
Glu
>WENV183551546
OOBI01026792
95875
Bacteroidota
TAG
Leu
>WENV183550695
OOBI01000021
44852
Bacteroidota
TAA
Leu
>WENV183551255
OOBI01001754
19528
Bacteroidota
GGA
Ser
>WENV183551148
OOBI01000844
425638
Bacteroidota
CTG
Gln
>WENV183551157
OOBI01000898
139062
Bacteroidota
TGG
Pro
>WENV183551315
OOBI01003057
23696
Bacteroidota
GCT
Ser
>WENV183551183
OOBI01001074
55270
Bacteroidota
TGA
Ser
>WENV183551119
OOBI01000743
55270
Bacteroidota
TGA
Ser
>WENV183550942
OOBI01000258
55270
Bacteroidota
TGA
Ser
>WENV183550834
OOBI01000111
55270
Bacteroidota
TGA
Ser
>WENV183550756
OOBI01000040
16224
Bacteroidota
GGA
Ser
>WENV183550741
OOBI01000034
16220
Bacteroidota
GGA
Ser
>WENV183551407
OOBI01007021
338125
Bacteroidota
CCT
Arg
>WENV183550697
OOBI01000021
338125
Bacteroidota
CCT
Arg
>WENV183551496
OOBI01019806
235129
Bacteroidota
GCC
Gly
>WENV183550655
OOBI01000007
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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