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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183553973
OOBM01000395
235097
Bacteroidota
TTT
Lys
>WENV183554083
OOBM01000818
95987
Bacteroidota
CAA
Leu
>WENV183553759
OOBM01000022
339412
Bacteroidota
GGT
Thr
>WENV183553797
OOBM01000063
235102
Bacteroidota
CGT
Thr
>WENV183554578
OOBM01041391
267954
Bacteroidota
GCC
Gly
>WENV183554229
OOBM01001881
144657
Bacteroidota
CGG
Pro
>WENV183553783
OOBM01000038
243025
Bacteroidota
CAT
Met
>WENV183553868
OOBM01000158
338155
Bacteroidota
CTC
Glu
>WENV183554407
OOBM01008351
153993
Bacteroidota
GAT
Ile
>WENV183554118
OOBM01000957
58715
Bacteroidota
GAG
Leu
>WENV183553738
OOBM01000010
95618
Bacteroidota
TAG
Leu
>WENV183554161
OOBM01001202
338486
Bacteroidota
CAT
Met
>WENV183554133
OOBM01001035
413663
Bacteroidota
CTG
Gln
>WENV183554132
OOBM01001035
413663
Bacteroidota
CTG
Gln
>WENV183553988
OOBM01000439
415410
Bacteroidota
TTG
Gln
>WENV183553936
OOBM01000304
415410
Bacteroidota
TTG
Gln
>WENV183553725
OOBM01000008
411543
Bacteroidota
CTG
Gln
>WENV183553760
OOBM01000022
237797
Bacteroidota
CCA
Trp
>WENV183554574
OOBM01040568
59689
Bacteroidota
CAG
Leu
>WENV183553869
OOBM01000162
412479
Bacteroidota
TTG
Gln
>WENV183553780
OOBM01000038
80835
Bacteroidota
GTA
Tyr
>WENV183554172
OOBM01001331
147147
Bacteroidota
GTG
His
>WENV183553753
OOBM01000020
147147
Bacteroidota
GTG
His
>WENV183553809
OOBM01000073
235182
Bacteroidota
>WENV183553794
OOBM01000060
338124
Bacteroidota
CCG
Arg
>WENV183554139
OOBM01001064
238121
Bacteroidota
CTT
Lys
>WENV183554289
OOBM01002795
126641
Bacteroidota
TAC
Val
>WENV183553964
OOBM01000367
338132
Bacteroidota
GCA
Cys
>WENV183553899
OOBM01000226
338132
Bacteroidota
GCA
Cys
>WENV183553856
OOBM01000128
338132
Bacteroidota
GCA
Cys
>WENV183553844
OOBM01000105
338132
Bacteroidota
GCA
Cys
>WENV183553838
OOBM01000093
144688
Bacteroidota
CAT
Met
>WENV183553870
OOBM01000162
37076
Bacteroidota
TAA
Leu
>WENV183553788
OOBM01000042
181746
Bacteroidota
GGC
Ala
>WENV183554128
OOBM01001021
144933
Bacteroidota
TCT
Arg
>WENV183553866
OOBM01000147
144933
Bacteroidota
TCT
Arg
>WENV183553803
OOBM01000067
144656
Bacteroidota
GTG
His
>WENV183553904
OOBM01000232
235207
Bacteroidota
CAT
Met
>WENV183554028
OOBM01000550
80607
Bacteroidota
GTA
Tyr
>WENV183553885
OOBM01000187
80607
Bacteroidota
GTA
Tyr
>WENV183554249
OOBM01002004
344769
Bacteroidota
CTC
Glu
>WENV183553875
OOBM01000177
344769
Bacteroidota
CTC
Glu
>WENV183554044
OOBM01000620
80614
Bacteroidota
>WENV183553723
OOBM01000007
154643
Bacteroidota
CAT
Met
>WENV183553821
OOBM01000085
95559
Bacteroidota
TAG
Leu
>WENV183553747
OOBM01000016
419272
Bacteroidota
CTG
Gln
>WENV183554284
OOBM01002699
144655
Bacteroidota
GGC
Ala
>WENV183553810
OOBM01000075
95875
Bacteroidota
TAG
Leu
>WENV183553786
OOBM01000040
240012
Bacteroidota
CCC
Gly
>WENV183553719
OOBM01000004
44852
Bacteroidota
TAA
Leu
>WENV183554467
OOBM01014931
147439
Bacteroidota
TCT
Arg
>WENV183553933
OOBM01000288
50727
Bacteroidota
TGA
Ser
>WENV183553874
OOBM01000170
50727
Bacteroidota
TGA
Ser
>WENV183553862
OOBM01000136
50727
Bacteroidota
TGA
Ser
>WENV183554256
OOBM01002074
132360
Bacteroidota
GGG
Pro
>WENV183553746
OOBM01000016
132360
Bacteroidota
GGG
Pro
>WENV183554300
OOBM01003214
425638
Bacteroidota
CTG
Gln
>WENV183553765
OOBM01000030
425638
Bacteroidota
CTG
Gln
>WENV183553935
OOBM01000298
19317
Bacteroidota
GGA
Ser
>WENV183553744
OOBM01000015
353927
Bacteroidota
TTC
Glu
>WENV183554045
OOBM01000620
185921
Bacteroidota
GTC
Asp
>WENV183553705
OOBM01000001
414426
Bacteroidota
CTG
Gln
>WENV183554188
OOBM01001431
16224
Bacteroidota
GGA
Ser
>WENV183553748
OOBM01000016
16220
Bacteroidota
GGA
Ser
>WENV183553720
OOBM01000004
338125
Bacteroidota
CCT
Arg
>WENV183553888
OOBM01000193
235129
Bacteroidota
GCC
Gly
>WENV183553774
OOBM01000035
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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