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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183583642
OOCQ01000014
419272
Bacteroidota
CTG
Gln
>WENV183583643
OOCQ01000014
19317
Bacteroidota
GGA
Ser
>WENV183583650
OOCQ01000019
353927
Bacteroidota
TTC
Glu
>WENV183583657
OOCQ01000024
414426
Bacteroidota
CTG
Gln
>WENV183583659
OOCQ01000029
145504
Bacteroidota
TGT
Thr
>WENV183583663
OOCQ01000034
147147
Bacteroidota
GTG
His
>WENV183583665
OOCQ01000038
113604
Bacteroidota
>WENV183583687
OOCQ01000074
303954
Bacteroidota
GCC
Gly
>WENV183583690
OOCQ01000079
412479
Bacteroidota
TTG
Gln
>WENV183583699
OOCQ01000091
338132
Bacteroidota
GCA
Cys
>WENV183583701
OOCQ01000091
338155
Bacteroidota
CTC
Glu
>WENV183583707
OOCQ01000100
154643
Bacteroidota
CAT
Met
>WENV183583737
OOCQ01000151
235207
Bacteroidota
CAT
Met
>WENV183583740
OOCQ01000153
235165
Bacteroidota
CCA
Trp
>WENV183583743
OOCQ01000157
132360
Bacteroidota
GGG
Pro
>WENV183583745
OOCQ01000158
144639
Bacteroidota
GGC
Ala
>WENV183583764
OOCQ01000215
193809
Bacteroidota
CAT
Met
>WENV183583767
OOCQ01000220
419272
Bacteroidota
CTG
Gln
>WENV183583768
OOCQ01000220
16220
Bacteroidota
GGA
Ser
>WENV183583794
OOCQ01000264
44852
Bacteroidota
TAA
Leu
>WENV183583803
OOCQ01000289
338124
Bacteroidota
CCG
Arg
>WENV183583809
OOCQ01000304
344769
Bacteroidota
CTC
Glu
>WENV183583820
OOCQ01000339
301449
Bacteroidota
CGG
Pro
>WENV183583832
OOCQ01000418
147147
Bacteroidota
GTG
His
>WENV183583858
OOCQ01000514
37076
Bacteroidota
TAA
Leu
>WENV183583875
OOCQ01000561
413663
Bacteroidota
CTG
Gln
>WENV183583876
OOCQ01000578
415410
Bacteroidota
TTG
Gln
>WENV183583878
OOCQ01000582
16224
Bacteroidota
GGA
Ser
>WENV183583910
OOCQ01000716
144695
Bacteroidota
CAT
Met
>WENV183583914
OOCQ01000742
419272
Bacteroidota
CTG
Gln
>WENV183583915
OOCQ01000742
419272
Bacteroidota
CTG
Gln
>WENV183583929
OOCQ01000811
151960
Bacteroidota
GGC
Ala
>WENV183583933
OOCQ01000845
95987
Bacteroidota
CAA
Leu
>WENV183583944
OOCQ01000899
150485
Bacteroidota
GTT
Asn
>WENV183583955
OOCQ01000982
52358
Bacteroidota
TGA
Ser
>WENV183583990
OOCQ01001177
353927
Bacteroidota
TTC
Glu
>WENV183584019
OOCQ01001358
243025
Bacteroidota
CAT
Met
>WENV183584021
OOCQ01001362
52358
Bacteroidota
TGA
Ser
>WENV183584068
OOCQ01001908
338125
Bacteroidota
CCT
Arg
>WENV183584088
OOCQ01002099
425638
Bacteroidota
CTG
Gln
>WENV183584176
OOCQ01003470
144655
Bacteroidota
GGC
Ala
>WENV183584179
OOCQ01003527
338486
Bacteroidota
CAT
Met
>WENV183584298
OOCQ01008008
411629
Bacteroidota
TTG
Gln
>WENV183584306
OOCQ01008220
240012
Bacteroidota
CCC
Gly
>WENV183584374
OOCQ01012273
175704
Bacteroidota
TGC
Ala
>WENV183584445
OOCQ01019261
147439
Bacteroidota
TCT
Arg
>WENV183584446
OOCQ01019318
95875
Bacteroidota
TAG
Leu
>WENV183584470
OOCQ01022541
237797
Bacteroidota
CCA
Trp
>WENV183584472
OOCQ01022741
237797
Bacteroidota
CCA
Trp
>WENV183584473
OOCQ01022753
144657
Bacteroidota
CGG
Pro
>WENV183584476
OOCQ01023260
126641
Bacteroidota
TAC
Val
>WENV183584554
OOCQ01036822
339412
Bacteroidota
GGT
Thr
>WENV183584562
OOCQ01038890
338125
Bacteroidota
CCT
Arg
>WENV183584572
OOCQ01041746
235129
Bacteroidota
GCC
Gly
>WENV183584643
OOCQ01070220
23696
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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