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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183585624
OOCS01000103
235182
Bacteroidota
>WENV183585670
OOCS01000148
113604
Bacteroidota
>WENV183586162
OOCS01004698
80614
Bacteroidota
>WENV183585997
OOCS01001243
58714
Bacteroidota
CAA
Leu
>WENV183586076
OOCS01002165
59689
Bacteroidota
CAG
Leu
>WENV183585834
OOCS01000392
59689
Bacteroidota
CAG
Leu
>WENV183585939
OOCS01000913
338486
Bacteroidota
CAT
Met
>WENV183585702
OOCS01000205
144688
Bacteroidota
CAT
Met
>WENV183585782
OOCS01000310
193809
Bacteroidota
CAT
Met
>WENV183585685
OOCS01000162
235207
Bacteroidota
CAT
Met
>WENV183585664
OOCS01000142
235207
Bacteroidota
CAT
Met
>WENV183586057
OOCS01001826
235180
Bacteroidota
CCA
Trp
>WENV183586014
OOCS01001331
235180
Bacteroidota
CCA
Trp
>WENV183585531
OOCS01000027
338124
Bacteroidota
CCG
Arg
>WENV183585964
OOCS01001050
343138
Bacteroidota
CCT
Arg
>WENV183585736
OOCS01000240
338314
Bacteroidota
CCT
Arg
>WENV183585475
OOCS01000001
338125
Bacteroidota
CCT
Arg
>WENV183585815
OOCS01000364
301449
Bacteroidota
CGG
Pro
>WENV183585814
OOCS01000361
301449
Bacteroidota
CGG
Pro
>WENV183585609
OOCS01000091
301449
Bacteroidota
CGG
Pro
>WENV183585848
OOCS01000443
235102
Bacteroidota
CGT
Thr
>WENV183585501
OOCS01000011
272983
Bacteroidota
CGT
Thr
>WENV183585963
OOCS01001033
338155
Bacteroidota
CTC
Glu
>WENV183585492
OOCS01000008
411543
Bacteroidota
CTG
Gln
>WENV183586022
OOCS01001426
411550
Bacteroidota
CTG
Gln
>WENV183585478
OOCS01000003
425638
Bacteroidota
CTG
Gln
>WENV183586026
OOCS01001509
238121
Bacteroidota
CTT
Lys
>WENV183586025
OOCS01001509
238121
Bacteroidota
CTT
Lys
>WENV183586077
OOCS01002165
58715
Bacteroidota
GAG
Leu
>WENV183585746
OOCS01000251
338132
Bacteroidota
GCA
Cys
>WENV183585735
OOCS01000239
338132
Bacteroidota
GCA
Cys
>WENV183586075
OOCS01002165
235129
Bacteroidota
GCC
Gly
>WENV183586023
OOCS01001427
235129
Bacteroidota
GCC
Gly
>WENV183585953
OOCS01000990
23696
Bacteroidota
GCT
Ser
>WENV183585823
OOCS01000379
20893
Bacteroidota
GGA
Ser
>WENV183585477
OOCS01000002
19317
Bacteroidota
GGA
Ser
>WENV183585999
OOCS01001251
16224
Bacteroidota
GGA
Ser
>WENV183585518
OOCS01000014
16224
Bacteroidota
GGA
Ser
>WENV183585634
OOCS01000123
16220
Bacteroidota
GGA
Ser
>WENV183585586
OOCS01000071
181746
Bacteroidota
GGC
Ala
>WENV183585536
OOCS01000029
144655
Bacteroidota
GGC
Ala
>WENV183585493
OOCS01000008
143169
Bacteroidota
GGG
Pro
>WENV183585485
OOCS01000006
143169
Bacteroidota
GGG
Pro
>WENV183585480
OOCS01000003
143169
Bacteroidota
GGG
Pro
>WENV183585630
OOCS01000116
139743
Bacteroidota
GGG
Pro
>WENV183586013
OOCS01001331
339341
Bacteroidota
GGT
Thr
>WENV183585819
OOCS01000374
80607
Bacteroidota
GTA
Tyr
>WENV183585726
OOCS01000229
80607
Bacteroidota
GTA
Tyr
>WENV183585750
OOCS01000260
94703
Bacteroidota
GTA
Tyr
>WENV183585565
OOCS01000046
94703
Bacteroidota
GTA
Tyr
>WENV183585794
OOCS01000338
185921
Bacteroidota
GTC
Asp
>WENV183585793
OOCS01000338
185921
Bacteroidota
GTC
Asp
>WENV183585517
OOCS01000014
144656
Bacteroidota
GTG
His
>WENV183585890
OOCS01000638
144659
Bacteroidota
GTG
His
>WENV183585889
OOCS01000638
144659
Bacteroidota
GTG
His
>WENV183585733
OOCS01000236
144590
Bacteroidota
GTT
Asn
>WENV183585732
OOCS01000236
144590
Bacteroidota
GTT
Asn
>WENV183585474
OOCS01000001
44852
Bacteroidota
TAA
Leu
>WENV183585615
OOCS01000095
95618
Bacteroidota
TAG
Leu
>WENV183585633
OOCS01000121
95559
Bacteroidota
TAG
Leu
>WENV183585590
OOCS01000077
95875
Bacteroidota
TAG
Leu
>WENV183585481
OOCS01000004
144933
Bacteroidota
TCT
Arg
>WENV183585933
OOCS01000870
147439
Bacteroidota
TCT
Arg
>WENV183586177
OOCS01005234
46165
Bacteroidota
TGA
Ser
>WENV183586027
OOCS01001509
45423
Bacteroidota
TGA
Ser
>WENV183586125
OOCS01003498
56823
Bacteroidota
TGA
Ser
>WENV183585696
OOCS01000197
56823
Bacteroidota
TGA
Ser
>WENV183585516
OOCS01000014
56823
Bacteroidota
TGA
Ser
>WENV183585677
OOCS01000155
338164
Bacteroidota
TTC
Glu
>WENV183585721
OOCS01000221
436206
Bacteroidota
TTG
Gln
>WENV183585476
OOCS01000001
436206
Bacteroidota
TTG
Gln
>WENV183585631
OOCS01000118
411629
Bacteroidota
TTG
Gln
>WENV183585486
OOCS01000006
235097
Bacteroidota
TTT
Lys
>WENV183585497
OOCS01000009
235097
Bacteroidota
TTT
Lys
>WENV183585580
OOCS01000063
235097
Bacteroidota
TTT
Lys
>WENV183585932
OOCS01000868
235203
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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