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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183586417
OOCT01000010
235097
Bacteroidota
TTT
Lys
>WENV183586882
OOCT01000609
235097
Bacteroidota
TTT
Lys
>WENV183586965
OOCT01001175
235097
Bacteroidota
TTT
Lys
>WENV183586770
OOCT01000363
141635
Bacteroidota
TAC
Val
>WENV183587071
OOCT01002503
141635
Bacteroidota
TAC
Val
>WENV183586580
OOCT01000128
235102
Bacteroidota
CGT
Thr
>WENV183586926
OOCT01000872
144657
Bacteroidota
CGG
Pro
>WENV183586504
OOCT01000055
97336
Bacteroidota
CAG
Leu
>WENV183586435
OOCT01000017
338155
Bacteroidota
CTC
Glu
>WENV183586561
OOCT01000112
338155
Bacteroidota
CTC
Glu
>WENV183586618
OOCT01000178
339341
Bacteroidota
GGT
Thr
>WENV183586648
OOCT01000218
343138
Bacteroidota
CCT
Arg
>WENV183586591
OOCT01000144
58715
Bacteroidota
GAG
Leu
>WENV183586712
OOCT01000284
46165
Bacteroidota
TGA
Ser
>WENV183586755
OOCT01000330
338486
Bacteroidota
CAT
Met
>WENV183586441
OOCT01000018
338486
Bacteroidota
CAT
Met
>WENV183587027
OOCT01001780
413663
Bacteroidota
CTG
Gln
>WENV183586717
OOCT01000296
59689
Bacteroidota
CAG
Leu
>WENV183586590
OOCT01000144
59689
Bacteroidota
CAG
Leu
>WENV183586784
OOCT01000378
436206
Bacteroidota
TTG
Gln
>WENV183586598
OOCT01000149
436206
Bacteroidota
TTG
Gln
>WENV183586488
OOCT01000047
436206
Bacteroidota
TTG
Gln
>WENV183586713
OOCT01000284
20893
Bacteroidota
GGA
Ser
>WENV183586535
OOCT01000074
144695
Bacteroidota
CAT
Met
>WENV183586593
OOCT01000147
338124
Bacteroidota
CCG
Arg
>WENV183586813
OOCT01000467
235203
Bacteroidota
TTT
Lys
>WENV183586639
OOCT01000212
235203
Bacteroidota
TTT
Lys
>WENV183586714
OOCT01000284
238121
Bacteroidota
CTT
Lys
>WENV183586422
OOCT01000014
126641
Bacteroidota
TAC
Val
>WENV183586982
OOCT01001312
338132
Bacteroidota
GCA
Cys
>WENV183586775
OOCT01000369
338132
Bacteroidota
GCA
Cys
>WENV183586635
OOCT01000204
338132
Bacteroidota
GCA
Cys
>WENV183586510
OOCT01000057
338132
Bacteroidota
GCA
Cys
>WENV183586405
OOCT01000006
338132
Bacteroidota
GCA
Cys
>WENV183586923
OOCT01000850
45423
Bacteroidota
TGA
Ser
>WENV183586681
OOCT01000258
193809
Bacteroidota
CAT
Met
>WENV183586471
OOCT01000040
37076
Bacteroidota
TAA
Leu
>WENV183586484
OOCT01000045
58714
Bacteroidota
CAA
Leu
>WENV183586765
OOCT01000354
301449
Bacteroidota
CGG
Pro
>WENV183586541
OOCT01000082
301449
Bacteroidota
CGG
Pro
>WENV183586514
OOCT01000059
301449
Bacteroidota
CGG
Pro
>WENV183586507
OOCT01000056
301449
Bacteroidota
CGG
Pro
>WENV183586487
OOCT01000046
301449
Bacteroidota
CGG
Pro
>WENV183586450
OOCT01000025
144933
Bacteroidota
TCT
Arg
>WENV183586384
OOCT01000001
144656
Bacteroidota
GTG
His
>WENV183586801
OOCT01000418
235207
Bacteroidota
CAT
Met
>WENV183586493
OOCT01000052
235207
Bacteroidota
CAT
Met
>WENV183586467
OOCT01000035
143169
Bacteroidota
GGG
Pro
>WENV183586446
OOCT01000023
143169
Bacteroidota
GGG
Pro
>WENV183586420
OOCT01000012
143169
Bacteroidota
GGG
Pro
>WENV183586439
OOCT01000018
144659
Bacteroidota
GTG
His
>WENV183586438
OOCT01000018
144659
Bacteroidota
GTG
His
>WENV183586437
OOCT01000018
144659
Bacteroidota
GTG
His
>WENV183586927
OOCT01000872
235180
Bacteroidota
CCA
Trp
>WENV183586607
OOCT01000160
144596
Bacteroidota
GGC
Ala
>WENV183587122
OOCT01005759
80607
Bacteroidota
GTA
Tyr
>WENV183586451
OOCT01000028
80607
Bacteroidota
GTA
Tyr
>WENV183586445
OOCT01000022
80607
Bacteroidota
GTA
Tyr
>WENV183586415
OOCT01000010
80607
Bacteroidota
GTA
Tyr
>WENV183586411
OOCT01000009
113604
Bacteroidota
>WENV183586657
OOCT01000231
344769
Bacteroidota
CTC
Glu
>WENV183586968
OOCT01001191
16999
Bacteroidota
GGA
Ser
>WENV183586436
OOCT01000018
80614
Bacteroidota
>WENV183586532
OOCT01000072
415558
Bacteroidota
TTG
Gln
>WENV183586637
OOCT01000208
95559
Bacteroidota
TAG
Leu
>WENV183586401
OOCT01000006
144655
Bacteroidota
GGC
Ala
>WENV183586647
OOCT01000218
338164
Bacteroidota
TTC
Glu
>WENV183586646
OOCT01000218
338164
Bacteroidota
TTC
Glu
>WENV183586483
OOCT01000045
95875
Bacteroidota
TAG
Leu
>WENV183586701
OOCT01000278
139743
Bacteroidota
GGG
Pro
>WENV183586617
OOCT01000175
240012
Bacteroidota
CCC
Gly
>WENV183586558
OOCT01000111
44852
Bacteroidota
TAA
Leu
>WENV183586616
OOCT01000175
147439
Bacteroidota
TCT
Arg
>WENV183586928
OOCT01000893
238606
Bacteroidota
CGG
Pro
>WENV183586563
OOCT01000115
411550
Bacteroidota
CTG
Gln
>WENV183586562
OOCT01000115
411550
Bacteroidota
CTG
Gln
>WENV183586399
OOCT01000005
19528
Bacteroidota
GGA
Ser
>WENV183586447
OOCT01000023
425638
Bacteroidota
CTG
Gln
>WENV183586423
OOCT01000014
425638
Bacteroidota
CTG
Gln
>WENV183586419
OOCT01000012
425638
Bacteroidota
CTG
Gln
>WENV183586410
OOCT01000007
425638
Bacteroidota
CTG
Gln
>WENV183586433
OOCT01000017
239647
Bacteroidota
TTT
Lys
>WENV183586398
OOCT01000004
19317
Bacteroidota
GGA
Ser
>WENV183587075
OOCT01002587
94703
Bacteroidota
GTA
Tyr
>WENV183586838
OOCT01000511
94703
Bacteroidota
GTA
Tyr
>WENV183586711
OOCT01000283
94703
Bacteroidota
GTA
Tyr
>WENV183586554
OOCT01000095
94703
Bacteroidota
GTA
Tyr
>WENV183586886
OOCT01000629
185921
Bacteroidota
GTC
Asp
>WENV183586802
OOCT01000430
185921
Bacteroidota
GTC
Asp
>WENV183586515
OOCT01000060
185921
Bacteroidota
GTC
Asp
>WENV183586560
OOCT01000112
23696
Bacteroidota
GCT
Ser
>WENV183586505
OOCT01000055
59498
Bacteroidota
GAG
Leu
>WENV183586609
OOCT01000162
56823
Bacteroidota
TGA
Ser
>WENV183586550
OOCT01000091
56823
Bacteroidota
TGA
Ser
>WENV183586511
OOCT01000058
56823
Bacteroidota
TGA
Ser
>WENV183586397
OOCT01000004
56823
Bacteroidota
TGA
Ser
>WENV183586396
OOCT01000004
56823
Bacteroidota
TGA
Ser
>WENV183586386
OOCT01000001
56823
Bacteroidota
TGA
Ser
>WENV183586918
OOCT01000811
16224
Bacteroidota
GGA
Ser
>WENV183586385
OOCT01000001
16224
Bacteroidota
GGA
Ser
>WENV183586466
OOCT01000035
16220
Bacteroidota
GGA
Ser
>WENV183586575
OOCT01000120
338125
Bacteroidota
CCT
Arg
>WENV183586442
OOCT01000020
338125
Bacteroidota
CCT
Arg
>WENV183586654
OOCT01000228
235129
Bacteroidota
GCC
Gly
>WENV183586589
OOCT01000144
235129
Bacteroidota
GCC
Gly
>WENV183586929
OOCT01000893
313363
Bacteroidota
GAA
Phe
>WENV183586869
OOCT01000578
313363
Bacteroidota
GAA
Phe
>WENV183586556
OOCT01000110
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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