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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183612299
OODU01000011
144933
Bacteroidota
TCT
Arg
>WENV183612301
OODU01000016
414426
Bacteroidota
CTG
Gln
>WENV183612314
OODU01000021
44852
Bacteroidota
TAA
Leu
>WENV183612344
OODU01000036
338132
Bacteroidota
GCA
Cys
>WENV183612352
OODU01000041
425638
Bacteroidota
CTG
Gln
>WENV183612366
OODU01000052
419272
Bacteroidota
CTG
Gln
>WENV183612365
OODU01000052
132360
Bacteroidota
GGG
Pro
>WENV183612391
OODU01000069
353927
Bacteroidota
TTC
Glu
>WENV183612393
OODU01000070
243025
Bacteroidota
CAT
Met
>WENV183612403
OODU01000084
44852
Bacteroidota
TAA
Leu
>WENV183612404
OODU01000085
17323
Bacteroidota
GGA
Ser
>WENV183612407
OODU01000087
144657
Bacteroidota
CGG
Pro
>WENV183612432
OODU01000117
338124
Bacteroidota
CCG
Arg
>WENV183612451
OODU01000132
341950
Bacteroidota
>WENV183612450
OODU01000132
132360
Bacteroidota
GGG
Pro
>WENV183612501
OODU01000196
338132
Bacteroidota
GCA
Cys
>WENV183612528
OODU01000258
95875
Bacteroidota
TAG
Leu
>WENV183612542
OODU01000270
80835
Bacteroidota
GTA
Tyr
>WENV183612548
OODU01000273
132360
Bacteroidota
GGG
Pro
>WENV183612554
OODU01000278
50727
Bacteroidota
TGA
Ser
>WENV183612580
OODU01000311
154643
Bacteroidota
CAT
Met
>WENV183612592
OODU01000317
150485
Bacteroidota
GTT
Asn
>WENV183612591
OODU01000317
150485
Bacteroidota
GTT
Asn
>WENV183612590
OODU01000317
150485
Bacteroidota
GTT
Asn
>WENV183612595
OODU01000319
235129
Bacteroidota
GCC
Gly
>WENV183612593
OODU01000319
235129
Bacteroidota
GCC
Gly
>WENV183612597
OODU01000326
414426
Bacteroidota
CTG
Gln
>WENV183612608
OODU01000350
235207
Bacteroidota
CAT
Met
>WENV183612619
OODU01000370
132360
Bacteroidota
GGG
Pro
>WENV183612618
OODU01000370
425638
Bacteroidota
CTG
Gln
>WENV183612620
OODU01000371
80607
Bacteroidota
GTA
Tyr
>WENV183612633
OODU01000391
185921
Bacteroidota
GTC
Asp
>WENV183612636
OODU01000408
338132
Bacteroidota
GCA
Cys
>WENV183612648
OODU01000425
144655
Bacteroidota
GGC
Ala
>WENV183612666
OODU01000452
338165
Bacteroidota
GGT
Thr
>WENV183612671
OODU01000471
238121
Bacteroidota
CTT
Lys
>WENV183612670
OODU01000471
238121
Bacteroidota
CTT
Lys
>WENV183612779
OODU01000660
338486
Bacteroidota
CAT
Met
>WENV183612810
OODU01000722
338132
Bacteroidota
GCA
Cys
>WENV183612854
OODU01000835
344692
Bacteroidota
GGT
Thr
>WENV183612859
OODU01000845
415410
Bacteroidota
TTG
Gln
>WENV183612980
OODU01001360
235102
Bacteroidota
CGT
Thr
>WENV183613021
OODU01001495
338132
Bacteroidota
GCA
Cys
>WENV183613020
OODU01001495
338132
Bacteroidota
GCA
Cys
>WENV183613028
OODU01001525
185921
Bacteroidota
GTC
Asp
>WENV183613036
OODU01001589
80607
Bacteroidota
GTA
Tyr
>WENV183613048
OODU01001671
144933
Bacteroidota
TCT
Arg
>WENV183613065
OODU01001746
415410
Bacteroidota
TTG
Gln
>WENV183613080
OODU01001795
415410
Bacteroidota
TTG
Gln
>WENV183613114
OODU01001902
338132
Bacteroidota
GCA
Cys
>WENV183613142
OODU01002043
144596
Bacteroidota
GGC
Ala
>WENV183613145
OODU01002058
44852
Bacteroidota
TAA
Leu
>WENV183613156
OODU01002090
338486
Bacteroidota
CAT
Met
>WENV183613246
OODU01002645
280660
Bacteroidota
CCA
Trp
>WENV183613255
OODU01002710
132360
Bacteroidota
GGG
Pro
>WENV183613322
OODU01003289
80614
Bacteroidota
>WENV183613328
OODU01003356
338125
Bacteroidota
CCT
Arg
>WENV183613353
OODU01003550
240012
Bacteroidota
CCC
Gly
>WENV183613360
OODU01003590
239647
Bacteroidota
TTT
Lys
>WENV183613376
OODU01003714
338155
Bacteroidota
CTC
Glu
>WENV183613402
OODU01004126
50727
Bacteroidota
TGA
Ser
>WENV183613433
OODU01004336
415410
Bacteroidota
TTG
Gln
>WENV183613453
OODU01004518
144639
Bacteroidota
GGC
Ala
>WENV183613455
OODU01004527
58715
Bacteroidota
GAG
Leu
>WENV183613454
OODU01004527
59689
Bacteroidota
CAG
Leu
>WENV183613471
OODU01004742
150485
Bacteroidota
GTT
Asn
>WENV183613477
OODU01004814
419272
Bacteroidota
CTG
Gln
>WENV183613479
OODU01004907
50727
Bacteroidota
TGA
Ser
>WENV183613485
OODU01005180
154643
Bacteroidota
CAT
Met
>WENV183613513
OODU01005741
415410
Bacteroidota
TTG
Gln
>WENV183613549
OODU01006012
338132
Bacteroidota
GCA
Cys
>WENV183613557
OODU01006152
425638
Bacteroidota
CTG
Gln
>WENV183613569
OODU01006452
80607
Bacteroidota
GTA
Tyr
>WENV183613597
OODU01006943
19317
Bacteroidota
GGA
Ser
>WENV183613624
OODU01007278
341950
Bacteroidota
>WENV183613654
OODU01008003
16999
Bacteroidota
GGA
Ser
>WENV183613690
OODU01008955
144590
Bacteroidota
GTT
Asn
>WENV183613689
OODU01008955
144590
Bacteroidota
GTT
Asn
>WENV183613719
OODU01009654
338155
Bacteroidota
CTC
Glu
>WENV183613731
OODU01009895
16220
Bacteroidota
GGA
Ser
>WENV183613762
OODU01010954
132360
Bacteroidota
GGG
Pro
>WENV183613765
OODU01011134
144655
Bacteroidota
GGC
Ala
>WENV183613784
OODU01011675
144656
Bacteroidota
GTG
His
>WENV183613786
OODU01011754
338132
Bacteroidota
GCA
Cys
>WENV183613799
OODU01012102
235165
Bacteroidota
CCA
Trp
>WENV183613801
OODU01012358
411629
Bacteroidota
TTG
Gln
>WENV183613821
OODU01012887
235207
Bacteroidota
CAT
Met
>WENV183613825
OODU01013368
235097
Bacteroidota
TTT
Lys
>WENV183613838
OODU01013649
144655
Bacteroidota
GGC
Ala
>WENV183613841
OODU01013763
235129
Bacteroidota
GCC
Gly
>WENV183613849
OODU01014147
235097
Bacteroidota
TTT
Lys
>WENV183613854
OODU01014292
235097
Bacteroidota
TTT
Lys
>WENV183613873
OODU01015368
235207
Bacteroidota
CAT
Met
>WENV183613894
OODU01015934
150485
Bacteroidota
GTT
Asn
>WENV183613895
OODU01015955
338132
Bacteroidota
GCA
Cys
>WENV183613918
OODU01017072
144659
Bacteroidota
GTG
His
>WENV183613932
OODU01017548
235102
Bacteroidota
CGT
Thr
>WENV183613941
OODU01017866
338132
Bacteroidota
GCA
Cys
>WENV183613955
OODU01019269
235207
Bacteroidota
CAT
Met
>WENV183614037
OODU01022172
425638
Bacteroidota
CTG
Gln
>WENV183614049
OODU01022886
150485
Bacteroidota
GTT
Asn
>WENV183614057
OODU01023624
238121
Bacteroidota
CTT
Lys
>WENV183614088
OODU01025654
338125
Bacteroidota
CCT
Arg
>WENV183614093
OODU01025792
145504
Bacteroidota
TGT
Thr
>WENV183614096
OODU01025948
235207
Bacteroidota
CAT
Met
>WENV183614114
OODU01026327
338132
Bacteroidota
GCA
Cys
>WENV183614113
OODU01026327
338132
Bacteroidota
GCA
Cys
>WENV183614117
OODU01026726
95559
Bacteroidota
TAG
Leu
>WENV183614123
OODU01027555
147439
Bacteroidota
TCT
Arg
>WENV183614134
OODU01028178
338125
Bacteroidota
CCT
Arg
>WENV183614142
OODU01028694
185921
Bacteroidota
GTC
Asp
>WENV183614160
OODU01030078
126641
Bacteroidota
TAC
Val
>WENV183614282
OODU01042801
235203
Bacteroidota
TTT
Lys
>WENV183614299
OODU01045768
338124
Bacteroidota
CCG
Arg
>WENV183614373
OODU01056036
338486
Bacteroidota
CAT
Met
>WENV183614415
OODU01064435
338155
Bacteroidota
CTC
Glu
>WENV183614419
OODU01067531
58714
Bacteroidota
CAA
Leu
>WENV183614491
OODU01094113
338132
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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