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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183631560
OOIF01000013
414426
Bacteroidota
CTG
Gln
>WENV183631573
OOIF01000024
419272
Bacteroidota
CTG
Gln
>WENV183631574
OOIF01000024
16220
Bacteroidota
GGA
Ser
>WENV183631575
OOIF01000024
139743
Bacteroidota
GGG
Pro
>WENV183631576
OOIF01000024
235097
Bacteroidota
TTT
Lys
>WENV183631614
OOIF01000042
80607
Bacteroidota
GTA
Tyr
>WENV183631630
OOIF01000055
301449
Bacteroidota
CGG
Pro
>WENV183631640
OOIF01000072
301449
Bacteroidota
CGG
Pro
>WENV183631657
OOIF01000082
353927
Bacteroidota
TTC
Glu
>WENV183631672
OOIF01000098
44852
Bacteroidota
TAA
Leu
>WENV183631674
OOIF01000100
235097
Bacteroidota
TTT
Lys
>WENV183631675
OOIF01000100
16224
Bacteroidota
GGA
Ser
>WENV183631714
OOIF01000135
55270
Bacteroidota
TGA
Ser
>WENV183631739
OOIF01000159
338125
Bacteroidota
CCT
Arg
>WENV183631754
OOIF01000167
126641
Bacteroidota
TAC
Val
>WENV183631763
OOIF01000174
267954
Bacteroidota
GCC
Gly
>WENV183631766
OOIF01000177
16224
Bacteroidota
GGA
Ser
>WENV183631768
OOIF01000183
19317
Bacteroidota
GGA
Ser
>WENV183631776
OOIF01000198
343138
Bacteroidota
CCT
Arg
>WENV183631781
OOIF01000202
55270
Bacteroidota
TGA
Ser
>WENV183631795
OOIF01000214
235207
Bacteroidota
CAT
Met
>WENV183631797
OOIF01000221
235097
Bacteroidota
TTT
Lys
>WENV183631799
OOIF01000224
436206
Bacteroidota
TTG
Gln
>WENV183631827
OOIF01000257
95559
Bacteroidota
TAG
Leu
>WENV183631851
OOIF01000278
338132
Bacteroidota
GCA
Cys
>WENV183631867
OOIF01000308
338132
Bacteroidota
GCA
Cys
>WENV183631873
OOIF01000322
436206
Bacteroidota
TTG
Gln
>WENV183631878
OOIF01000325
126641
Bacteroidota
TAC
Val
>WENV183631912
OOIF01000414
23696
Bacteroidota
GCT
Ser
>WENV183631914
OOIF01000419
267954
Bacteroidota
GCC
Gly
>WENV183631922
OOIF01000446
147439
Bacteroidota
TCT
Arg
>WENV183631927
OOIF01000479
338164
Bacteroidota
TTC
Glu
>WENV183631950
OOIF01000523
338124
Bacteroidota
CCG
Arg
>WENV183631960
OOIF01000538
243025
Bacteroidota
CAT
Met
>WENV183631984
OOIF01000612
151121
Bacteroidota
CAT
Met
>WENV183632037
OOIF01000811
425638
Bacteroidota
CTG
Gln
>WENV183632059
OOIF01000898
154643
Bacteroidota
CAT
Met
>WENV183632095
OOIF01001048
139743
Bacteroidota
GGG
Pro
>WENV183632098
OOIF01001060
280513
Bacteroidota
TTT
Lys
>WENV183632108
OOIF01001109
20893
Bacteroidota
GGA
Ser
>WENV183632124
OOIF01001170
151960
Bacteroidota
GGC
Ala
>WENV183632137
OOIF01001237
338486
Bacteroidota
CAT
Met
>WENV183632161
OOIF01001352
144656
Bacteroidota
GTG
His
>WENV183632181
OOIF01001460
338132
Bacteroidota
GCA
Cys
>WENV183632184
OOIF01001496
338486
Bacteroidota
CAT
Met
>WENV183632217
OOIF01001734
139743
Bacteroidota
GGG
Pro
>WENV183632255
OOIF01001936
235102
Bacteroidota
CGT
Thr
>WENV183632259
OOIF01001950
95875
Bacteroidota
TAG
Leu
>WENV183632278
OOIF01002113
155123
Bacteroidota
GTT
Asn
>WENV183632281
OOIF01002145
240012
Bacteroidota
CCC
Gly
>WENV183632288
OOIF01002182
301449
Bacteroidota
CGG
Pro
>WENV183632301
OOIF01002317
144590
Bacteroidota
GTT
Asn
>WENV183632312
OOIF01002477
58715
Bacteroidota
GAG
Leu
>WENV183632325
OOIF01002600
425638
Bacteroidota
CTG
Gln
>WENV183632359
OOIF01002874
338132
Bacteroidota
GCA
Cys
>WENV183632376
OOIF01003032
235129
Bacteroidota
GCC
Gly
>WENV183632385
OOIF01003058
59689
Bacteroidota
CAG
Leu
>WENV183632393
OOIF01003119
80614
Bacteroidota
>WENV183632395
OOIF01003146
139743
Bacteroidota
GGG
Pro
>WENV183632396
OOIF01003150
411550
Bacteroidota
CTG
Gln
>WENV183632427
OOIF01003460
243025
Bacteroidota
CAT
Met
>WENV183632445
OOIF01003702
24174
Bacteroidota
GCT
Ser
>WENV183632477
OOIF01004269
126965
Bacteroidota
GGG
Pro
>WENV183632505
OOIF01004812
50727
Bacteroidota
TGA
Ser
>WENV183632528
OOIF01005365
411543
Bacteroidota
CTG
Gln
>WENV183632533
OOIF01005464
144659
Bacteroidota
GTG
His
>WENV183632534
OOIF01005464
144659
Bacteroidota
GTG
His
>WENV183632546
OOIF01005703
338155
Bacteroidota
CTC
Glu
>WENV183632550
OOIF01005800
144657
Bacteroidota
CGG
Pro
>WENV183632551
OOIF01005800
235180
Bacteroidota
CCA
Trp
>WENV183632573
OOIF01006726
235097
Bacteroidota
TTT
Lys
>WENV183632594
OOIF01007598
126966
Bacteroidota
TAC
Val
>WENV183632595
OOIF01007598
126966
Bacteroidota
TAC
Val
>WENV183632690
OOIF01011456
436206
Bacteroidota
TTG
Gln
>WENV183632732
OOIF01013656
238121
Bacteroidota
CTT
Lys
>WENV183632733
OOIF01013656
45423
Bacteroidota
TGA
Ser
>WENV183632833
OOIF01023418
146761
Bacteroidota
GAT
Ile
>WENV183632865
OOIF01030323
58714
Bacteroidota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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