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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183637308
OQVH01000001
37076
Bacteroidota
TAA
Leu
>WENV183637310
OQVH01000001
412479
Bacteroidota
TTG
Gln
>WENV183637327
OQVH01000011
313363
Bacteroidota
GAA
Phe
>WENV183637338
OQVH01000022
95987
Bacteroidota
CAA
Leu
>WENV183637387
OQVH01000070
413663
Bacteroidota
CTG
Gln
>WENV183637417
OQVH01000118
339412
Bacteroidota
GGT
Thr
>WENV183637418
OQVH01000118
237797
Bacteroidota
CCA
Trp
>WENV183637429
OQVH01000135
338132
Bacteroidota
GCA
Cys
>WENV183637434
OQVH01000140
338124
Bacteroidota
CCG
Arg
>WENV183637454
OQVH01000180
147147
Bacteroidota
GTG
His
>WENV183637479
OQVH01000235
144590
Bacteroidota
GTT
Asn
>WENV183637480
OQVH01000235
144590
Bacteroidota
GTT
Asn
>WENV183637482
OQVH01000249
313363
Bacteroidota
GAA
Phe
>WENV183637495
OQVH01000287
425638
Bacteroidota
CTG
Gln
>WENV183637512
OQVH01000341
44852
Bacteroidota
TAA
Leu
>WENV183637519
OQVH01000370
80607
Bacteroidota
GTA
Tyr
>WENV183637527
OQVH01000383
394247
Bacteroidota
CTC
Glu
>WENV183637528
OQVH01000383
394247
Bacteroidota
CTC
Glu
>WENV183637540
OQVH01000409
338132
Bacteroidota
GCA
Cys
>WENV183637546
OQVH01000416
235097
Bacteroidota
TTT
Lys
>WENV183637567
OQVH01000524
235207
Bacteroidota
CAT
Met
>WENV183637572
OQVH01000548
235097
Bacteroidota
TTT
Lys
>WENV183637578
OQVH01000585
94703
Bacteroidota
GTA
Tyr
>WENV183637584
OQVH01000595
238121
Bacteroidota
CTT
Lys
>WENV183637585
OQVH01000595
45423
Bacteroidota
TGA
Ser
>WENV183637587
OQVH01000607
59689
Bacteroidota
CAG
Leu
>WENV183637621
OQVH01000740
16220
Bacteroidota
GGA
Ser
>WENV183637627
OQVH01000803
436206
Bacteroidota
TTG
Gln
>WENV183637638
OQVH01000861
145504
Bacteroidota
TGT
Thr
>WENV183637641
OQVH01000870
301449
Bacteroidota
CGG
Pro
>WENV183637643
OQVH01000870
80607
Bacteroidota
GTA
Tyr
>WENV183637644
OQVH01000874
240012
Bacteroidota
CCC
Gly
>WENV183637662
OQVH01000954
143169
Bacteroidota
GGG
Pro
>WENV183637688
OQVH01001111
56823
Bacteroidota
TGA
Ser
>WENV183637694
OQVH01001131
196394
Bacteroidota
GTC
Asp
>WENV183637705
OQVH01001212
23696
Bacteroidota
GCT
Ser
>WENV183637719
OQVH01001301
436206
Bacteroidota
TTG
Gln
>WENV183637724
OQVH01001330
20893
Bacteroidota
GGA
Ser
>WENV183637731
OQVH01001358
150485
Bacteroidota
GTT
Asn
>WENV183637743
OQVH01001481
144656
Bacteroidota
GTG
His
>WENV183637749
OQVH01001522
144657
Bacteroidota
CGG
Pro
>WENV183637750
OQVH01001522
235180
Bacteroidota
CCA
Trp
>WENV183637754
OQVH01001564
56823
Bacteroidota
TGA
Ser
>WENV183637757
OQVH01001571
143169
Bacteroidota
GGG
Pro
>WENV183637758
OQVH01001572
150485
Bacteroidota
GTT
Asn
>WENV183637766
OQVH01001624
425638
Bacteroidota
CTG
Gln
>WENV183637768
OQVH01001634
56823
Bacteroidota
TGA
Ser
>WENV183637786
OQVH01001859
196394
Bacteroidota
GTC
Asp
>WENV183637787
OQVH01001863
150485
Bacteroidota
GTT
Asn
>WENV183637792
OQVH01001889
139743
Bacteroidota
GGG
Pro
>WENV183637803
OQVH01002005
95875
Bacteroidota
TAG
Leu
>WENV183637810
OQVH01002052
143169
Bacteroidota
GGG
Pro
>WENV183637819
OQVH01002209
141635
Bacteroidota
TAC
Val
>WENV183637830
OQVH01002305
235102
Bacteroidota
CGT
Thr
>WENV183637841
OQVH01002432
80614
Bacteroidota
>WENV183637865
OQVH01002749
338164
Bacteroidota
TTC
Glu
>WENV183637884
OQVH01003033
95559
Bacteroidota
TAG
Leu
>WENV183637912
OQVH01003367
235129
Bacteroidota
GCC
Gly
>WENV183637923
OQVH01003639
80607
Bacteroidota
GTA
Tyr
>WENV183637926
OQVH01003692
56823
Bacteroidota
TGA
Ser
>WENV183637952
OQVH01004053
154643
Bacteroidota
CAT
Met
>WENV183637956
OQVH01004132
243025
Bacteroidota
CAT
Met
>WENV183637965
OQVH01004402
58715
Bacteroidota
GAG
Leu
>WENV183638002
OQVH01004882
353927
Bacteroidota
TTC
Glu
>WENV183638024
OQVH01005562
303954
Bacteroidota
GCC
Gly
>WENV183638038
OQVH01005892
343138
Bacteroidota
CCT
Arg
>WENV183638069
OQVH01006824
144655
Bacteroidota
GGC
Ala
>WENV183638080
OQVH01007292
338486
Bacteroidota
CAT
Met
>WENV183638133
OQVH01010029
414426
Bacteroidota
CTG
Gln
>WENV183638144
OQVH01010472
235203
Bacteroidota
TTT
Lys
>WENV183638162
OQVH01011135
153993
Bacteroidota
GAT
Ile
>WENV183638174
OQVH01011743
16224
Bacteroidota
GGA
Ser
>WENV183638177
OQVH01011818
235165
Bacteroidota
CCA
Trp
>WENV183638179
OQVH01011900
353927
Bacteroidota
TTC
Glu
>WENV183638187
OQVH01012370
144659
Bacteroidota
GTG
His
>WENV183638191
OQVH01012797
267954
Bacteroidota
GCC
Gly
>WENV183638267
OQVH01019692
144596
Bacteroidota
GGC
Ala
>WENV183638295
OQVH01022636
56823
Bacteroidota
TGA
Ser
>WENV183638312
OQVH01024498
175704
Bacteroidota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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