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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
137 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183729670
PJTR01000008
194719
Bacteroidota
CAT
Met
>WENV183729671
PJTR01000008
399343
Bacteroidota
TTC
Glu
>WENV183729672
PJTR01000008
399343
Bacteroidota
TTC
Glu
>WENV183729682
PJTR01000014
183378
Bacteroidota
GGC
Ala
>WENV183729686
PJTR01000016
363233
Bacteroidota
TTT
Lys
>WENV183729691
PJTR01000018
281213
Bacteroidota
TGT
Thr
>WENV183729694
PJTR01000018
403862
Bacteroidota
GGT
Thr
>WENV183729695
PJTR01000018
481263
Bacteroidota
CCA
Trp
>WENV183729701
PJTR01000021
281207
Bacteroidota
GAA
Phe
>WENV183729702
PJTR01000021
281207
Bacteroidota
GAA
Phe
>WENV183729703
PJTR01000021
281207
Bacteroidota
GAA
Phe
>WENV183729715
PJTR01000029
300953
Bacteroidota
TTT
Lys
>WENV183729716
PJTR01000029
300953
Bacteroidota
TTT
Lys
>WENV183729718
PJTR01000029
300953
Bacteroidota
TTT
Lys
>WENV183729725
PJTR01000030
240785
Bacteroidota
GTC
Asp
>WENV183729724
PJTR01000030
240785
Bacteroidota
GTC
Asp
>WENV183729722
PJTR01000030
366169
Bacteroidota
GAA
Phe
>WENV183729723
PJTR01000030
366169
Bacteroidota
GAA
Phe
>WENV183729720
PJTR01000030
336000
Bacteroidota
CAT
Met
>WENV183729721
PJTR01000030
336000
Bacteroidota
CAT
Met
>WENV183729730
PJTR01000033
64185
Bacteroidota
TGA
Ser
>WENV183729735
PJTR01000036
176607
Bacteroidota
CAT
Met
>WENV183729747
PJTR01000043
486363
Bacteroidota
TTG
Gln
>WENV183729746
PJTR01000043
187426
Bacteroidota
GGC
Ala
>WENV183729751
PJTR01000046
156756
Bacteroidota
TGG
Pro
>WENV183729750
PJTR01000046
74253
Bacteroidota
GCT
Ser
>WENV183729752
PJTR01000046
184112
Bacteroidota
TCT
Arg
>WENV183729755
PJTR01000048
179466
Bacteroidota
GTG
His
>WENV183729754
PJTR01000048
56363
Bacteroidota
TGA
Ser
>WENV183729759
PJTR01000057
56363
Bacteroidota
TGA
Ser
>WENV183729767
PJTR01000065
179374
Bacteroidota
TGG
Pro
>WENV183729768
PJTR01000065
179374
Bacteroidota
TGG
Pro
>WENV183729771
PJTR01000068
168732
Bacteroidota
TGG
Pro
>WENV183729772
PJTR01000068
187628
Bacteroidota
TCT
Arg
>WENV183729774
PJTR01000069
336000
Bacteroidota
CAT
Met
>WENV183729775
PJTR01000069
336000
Bacteroidota
CAT
Met
>WENV183729773
PJTR01000069
399343
Bacteroidota
TTC
Glu
>WENV183729780
PJTR01000071
409459
Bacteroidota
TTC
Glu
>WENV183729781
PJTR01000071
409459
Bacteroidota
TTC
Glu
>WENV183729783
PJTR01000072
177083
Bacteroidota
TGT
Thr
>WENV183729784
PJTR01000072
177083
Bacteroidota
TGT
Thr
>WENV183729788
PJTR01000077
284228
Bacteroidota
CAT
Met
>WENV183729789
PJTR01000077
281193
Bacteroidota
CAT
Met
>WENV183729790
PJTR01000077
281193
Bacteroidota
CAT
Met
>WENV183729799
PJTR01000082
20278
Bacteroidota
GGA
Ser
>WENV183729820
PJTR01000097
200370
Bacteroidota
CAT
Met
>WENV183729837
PJTR01000109
480500
Bacteroidota
GCA
Cys
>WENV183729840
PJTR01000111
240785
Bacteroidota
GTC
Asp
>WENV183729845
PJTR01000122
177083
Bacteroidota
TGT
Thr
>WENV183729846
PJTR01000122
177083
Bacteroidota
TGT
Thr
>WENV183729860
PJTR01000135
155775
Bacteroidota
TAC
Val
>WENV183729863
PJTR01000137
283107
Bacteroidota
GCC
Gly
>WENV183729874
PJTR01000141
182483
Bacteroidota
GTG
His
>WENV183729879
PJTR01000144
140923
Bacteroidota
GTA
Tyr
>WENV183729893
PJTR01000154
60989
Bacteroidota
TAA
Leu
>WENV183729908
PJTR01000178
336000
Bacteroidota
CAT
Met
>WENV183729913
PJTR01000185
344503
Bacteroidota
TTT
Lys
>WENV183729914
PJTR01000185
344503
Bacteroidota
TTT
Lys
>WENV183729916
PJTR01000185
344503
Bacteroidota
TTT
Lys
>WENV183729918
PJTR01000192
198027
Bacteroidota
GGC
Ala
>WENV183729932
PJTR01000196
192263
Bacteroidota
CAT
Met
>WENV183729942
PJTR01000221
179374
Bacteroidota
TGG
Pro
>WENV183729943
PJTR01000224
336000
Bacteroidota
CAT
Met
>WENV183729945
PJTR01000226
240785
Bacteroidota
GTC
Asp
>WENV183729957
PJTR01000239
179380
Bacteroidota
GGG
Pro
>WENV183729967
PJTR01000255
287318
Bacteroidota
GAA
Phe
>WENV183729968
PJTR01000258
349713
Bacteroidota
TCC
Gly
>WENV183729969
PJTR01000258
349713
Bacteroidota
TCC
Gly
>WENV183729978
PJTR01000278
178366
Bacteroidota
CAT
Met
>WENV183729989
PJTR01000294
336000
Bacteroidota
CAT
Met
>WENV183729988
PJTR01000294
409459
Bacteroidota
TTC
Glu
>WENV183729991
PJTR01000303
349713
Bacteroidota
TCC
Gly
>WENV183729992
PJTR01000303
349713
Bacteroidota
TCC
Gly
>WENV183730008
PJTR01000329
480996
Bacteroidota
CCA
Trp
>WENV183730021
PJTR01000337
192263
Bacteroidota
CAT
Met
>WENV183730027
PJTR01000344
409459
Bacteroidota
TTC
Glu
>WENV183730028
PJTR01000344
399343
Bacteroidota
TTC
Glu
>WENV183730029
PJTR01000347
182483
Bacteroidota
GTG
His
>WENV183730032
PJTR01000372
283107
Bacteroidota
GCC
Gly
>WENV183730033
PJTR01000379
480996
Bacteroidota
CCA
Trp
>WENV183730043
PJTR01000403
191942
Bacteroidota
TCG
Arg
>WENV183730044
PJTR01000415
485115
Bacteroidota
TTG
Gln
>WENV183730045
PJTR01000415
485115
Bacteroidota
TTG
Gln
>WENV183730046
PJTR01000417
287318
Bacteroidota
GAA
Phe
>WENV183730053
PJTR01000423
140923
Bacteroidota
GTA
Tyr
>WENV183730057
PJTR01000438
349713
Bacteroidota
TCC
Gly
>WENV183730058
PJTR01000441
349713
Bacteroidota
TCC
Gly
>WENV183730060
PJTR01000449
399343
Bacteroidota
TTC
Glu
>WENV183730063
PJTR01000459
287318
Bacteroidota
GAA
Phe
>WENV183730064
PJTR01000459
46780
Bacteroidota
TAA
Leu
>WENV183730076
PJTR01000532
64185
Bacteroidota
TGA
Ser
>WENV183730077
PJTR01000532
64185
Bacteroidota
TGA
Ser
>WENV183730083
PJTR01000550
179374
Bacteroidota
TGG
Pro
>WENV183730084
PJTR01000556
344503
Bacteroidota
TTT
Lys
>WENV183730086
PJTR01000556
344503
Bacteroidota
TTT
Lys
>WENV183730102
PJTR01000725
178366
Bacteroidota
CAT
Met
>WENV183730103
PJTR01000731
218274
Bacteroidota
CAT
Met
>WENV183730104
PJTR01000731
298201
Bacteroidota
TTT
Lys
>WENV183730105
PJTR01000754
363233
Bacteroidota
TTT
Lys
>WENV183730110
PJTR01000764
240785
Bacteroidota
GTC
Asp
>WENV183730111
PJTR01000764
240785
Bacteroidota
GTC
Asp
>WENV183730116
PJTR01000872
336000
Bacteroidota
CAT
Met
>WENV183730117
PJTR01000934
156756
Bacteroidota
TGG
Pro
>WENV183730118
PJTR01000938
156756
Bacteroidota
TGG
Pro
>WENV183730126
PJTR01000967
140923
Bacteroidota
GTA
Tyr
>WENV183730127
PJTR01001046
409459
Bacteroidota
TTC
Glu
>WENV183730132
PJTR01001081
344503
Bacteroidota
TTT
Lys
>WENV183730142
PJTR01001255
482086
Bacteroidota
>WENV183730144
PJTR01001270
482086
Bacteroidota
>WENV183730150
PJTR01001374
287318
Bacteroidota
GAA
Phe
>WENV183730151
PJTR01001374
46780
Bacteroidota
TAA
Leu
>WENV183730167
PJTR01001736
405962
Bacteroidota
GGT
Thr
>WENV183730166
PJTR01001736
140923
Bacteroidota
GTA
Tyr
>WENV183730165
PJTR01001736
177083
Bacteroidota
TGT
Thr
>WENV183730174
PJTR01002041
405962
Bacteroidota
GGT
Thr
>WENV183730173
PJTR01002041
140923
Bacteroidota
GTA
Tyr
>WENV183730172
PJTR01002041
177083
Bacteroidota
TGT
Thr
>WENV183730180
PJTR01002267
363233
Bacteroidota
TTT
Lys
>WENV183730201
PJTR01004054
46780
Bacteroidota
TAA
Leu
>WENV183730204
PJTR01004512
46780
Bacteroidota
TAA
Leu
>WENV183730211
PJTR01004974
304112
Bacteroidota
GAA
Phe
>WENV183730221
PJTR01005545
337835
Bacteroidota
GCC
Gly
>WENV183730224
PJTR01005863
156339
Bacteroidota
TAC
Val
>WENV183730239
PJTR01006614
480996
Bacteroidota
CCA
Trp
>WENV183730245
PJTR01006931
281210
Bacteroidota
GCC
Gly
>WENV183730246
PJTR01007089
240785
Bacteroidota
GTC
Asp
>WENV183730247
PJTR01007089
240785
Bacteroidota
GTC
Asp
>WENV183730258
PJTR01008247
195531
Bacteroidota
GTC
Asp
>WENV183730268
PJTR01010323
480500
Bacteroidota
GCA
Cys
>WENV183730275
PJTR01012647
281207
Bacteroidota
GAA
Phe
>WENV183730297
PJTR01017119
179377
Bacteroidota
GTG
His
>WENV183730309
PJTR01018359
56539
Bacteroidota
TGA
Ser
>WENV183730327
PJTR01021738
56539
Bacteroidota
TGA
Ser
>WENV183730335
PJTR01025244
56539
Bacteroidota
TGA
Ser
>WENV183730360
PJTR01032454
179374
Bacteroidota
TGG
Pro
>WENV183730365
PJTR01032629
283107
Bacteroidota
GCC
Gly
>WENV183730366
PJTR01032629
46780
Bacteroidota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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