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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170571187
FLOH01000088
270748
Actinomycetota
CGG
Pro
>WENV170571688
FLOH01000269
270748
Actinomycetota
CGG
Pro
>WENV170571747
FLOH01000288
467208
Actinomycetota
CCT
Arg
>WENV170570988
FLOH01000048
780234
Actinomycetota
GCA
Cys
>WENV170570420
FLOH01000004
88686
Actinomycetota
GGA
Ser
>WENV170572728
FLOH01001229
88686
Actinomycetota
GGA
Ser
>WENV170570410
FLOH01000004
780803
Actinomycetota
TCC
Gly
>WENV170571099
FLOH01000071
780803
Actinomycetota
TCC
Gly
>WENV170571940
FLOH01000400
780803
Actinomycetota
TCC
Gly
>WENV170571996
FLOH01000439
780803
Actinomycetota
TCC
Gly
>WENV170572410
FLOH01000827
780803
Actinomycetota
TCC
Gly
>WENV170572900
FLOH01001476
780803
Actinomycetota
TCC
Gly
>WENV170572226
FLOH01000635
282360
Actinomycetota
CAT
Met
>WENV170572610
FLOH01001021
282360
Actinomycetota
CAT
Met
>WENV170570419
FLOH01000004
319115
Actinomycetota
GAA
Phe
>WENV170571705
FLOH01000273
779541
Actinomycetota
GCA
Cys
>WENV170571901
FLOH01000366
452678
Actinomycetota
ACG
Arg
>WENV170572227
FLOH01000635
282359
Actinomycetota
CCA
Trp
>WENV170572611
FLOH01001021
282359
Actinomycetota
CCA
Trp
>WENV170571995
FLOH01000439
471473
Actinomycetota
TGG
Pro
>WENV170571930
FLOH01000390
660141
Actinomycetota
GTT
Asn
>WENV170571979
FLOH01000428
660141
Actinomycetota
GTT
Asn
>WENV170572720
FLOH01001211
232579
Actinomycetota
TAG
Leu
>WENV170572426
FLOH01000850
292076
Actinomycetota
GTC
Asp
>WENV170570997
FLOH01000049
458396
Actinomycetota
CGC
Ala
>WENV170572212
FLOH01000624
458396
Actinomycetota
CGC
Ala
>WENV170570448
FLOH01000004
684450
Actinomycetota
GAC
Val
>WENV170572618
FLOH01001029
684450
Actinomycetota
GAC
Val
>WENV170570755
FLOH01000020
272485
Actinomycetota
TGG
Pro
>WENV170570423
FLOH01000004
464110
Actinomycetota
TGC
Ala
>WENV170572310
FLOH01000729
464110
Actinomycetota
TGC
Ala
>WENV170571104
FLOH01000071
484425
Actinomycetota
TGG
Pro
>WENV170571860
FLOH01000347
484425
Actinomycetota
TGG
Pro
>WENV170571939
FLOH01000400
484425
Actinomycetota
TGG
Pro
>WENV170572408
FLOH01000827
484425
Actinomycetota
TGG
Pro
>WENV170572810
FLOH01001317
87226
Actinomycetota
GGA
Ser
>WENV170570771
FLOH01000022
272594
Actinomycetota
CAT
Met
>WENV170571401
FLOH01000149
272594
Actinomycetota
CAT
Met
>WENV170572616
FLOH01001029
504643
Actinomycetota
GCC
Gly
>WENV170572628
FLOH01001047
664552
Actinomycetota
TAC
Val
>WENV170572706
FLOH01001190
504642
Actinomycetota
GGC
Ala
>WENV170570425
FLOH01000004
155102
Actinomycetota
TGA
Ser
>WENV170572725
FLOH01001229
155102
Actinomycetota
TGA
Ser
>WENV170570428
FLOH01000004
182194
Actinomycetota
GTA
Tyr
>WENV170572224
FLOH01000635
182194
Actinomycetota
GTA
Tyr
>WENV170570446
FLOH01000004
461088
Actinomycetota
GCC
Gly
>WENV170572006
FLOH01000443
461088
Actinomycetota
GCC
Gly
>WENV170572007
FLOH01000443
784386
Actinomycetota
GCA
Cys
>WENV170572617
FLOH01001029
784386
Actinomycetota
GCA
Cys
>WENV170572831
FLOH01001362
779697
Actinomycetota
CCC
Gly
>WENV170570776
FLOH01000022
474429
Actinomycetota
TTC
Glu
>WENV170570987
FLOH01000048
452027
Actinomycetota
GCC
Gly
>WENV170571704
FLOH01000273
452027
Actinomycetota
GCC
Gly
>WENV170572858
FLOH01001439
452027
Actinomycetota
GCC
Gly
>WENV170571078
FLOH01000065
458398
Actinomycetota
CTC
Glu
>WENV170571899
FLOH01000366
458398
Actinomycetota
CTC
Glu
>WENV170572292
FLOH01000704
458398
Actinomycetota
CTC
Glu
>WENV170572791
FLOH01001299
684449
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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