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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170639189
JFJP01001334
228674
Bacteroidota
CAA
Leu
>WENV170642765
JFJP01044459
228674
Bacteroidota
CAA
Leu
>WENV170642490
JFJP01041572
72832
Bacteroidota
TAA
Leu
>WENV170639183
JFJP01001316
780177
Bacteroidota
CCA
Trp
>WENV170641622
JFJP01037224
455588
Bacteroidota
GAA
Phe
>WENV170642174
JFJP01039421
455588
Bacteroidota
GAA
Phe
>WENV170639192
JFJP01001350
781675
Bacteroidota
>WENV170639195
JFJP01001392
781675
Bacteroidota
>WENV170643096
JFJP01049921
658281
Bacteroidota
TTC
Glu
>WENV170643097
JFJP01049921
658281
Bacteroidota
TTC
Glu
>WENV170641530
JFJP01037134
112241
Bacteroidota
CAA
Leu
>WENV170641814
JFJP01037720
112241
Bacteroidota
CAA
Leu
>WENV170642181
JFJP01039491
112241
Bacteroidota
CAA
Leu
>WENV170642948
JFJP01047289
87190
Bacteroidota
TGA
Ser
>WENV170639185
JFJP01001326
297979
Bacteroidota
GTT
Asn
>WENV170643237
JFJP01052030
297979
Bacteroidota
GTT
Asn
>WENV170639173
JFJP01001261
241622
Bacteroidota
TAC
Val
>WENV170642330
JFJP01040275
241622
Bacteroidota
TAC
Val
>WENV170643076
JFJP01049329
279396
Bacteroidota
GGC
Ala
>WENV170641898
JFJP01037995
240995
Bacteroidota
TAC
Val
>WENV170639165
JFJP01001227
181685
Bacteroidota
TAG
Leu
>WENV170640780
JFJP01024503
275627
Bacteroidota
GTC
Asp
>WENV170641912
JFJP01038129
275627
Bacteroidota
GTC
Asp
>WENV170642794
JFJP01044960
275627
Bacteroidota
GTC
Asp
>WENV170641918
JFJP01038154
782390
Bacteroidota
TTG
Gln
>WENV170639163
JFJP01001221
454691
Bacteroidota
GCC
Gly
>WENV170639193
JFJP01001389
454691
Bacteroidota
GCC
Gly
>WENV170639169
JFJP01001242
240996
Bacteroidota
TGG
Pro
>WENV170639174
JFJP01001265
240996
Bacteroidota
TGG
Pro
>WENV170642921
JFJP01047093
454410
Bacteroidota
TTT
Lys
>WENV170642923
JFJP01047093
454410
Bacteroidota
TTT
Lys
>WENV170642770
JFJP01044523
218695
Bacteroidota
GTA
Tyr
>WENV170641919
JFJP01038157
281768
Bacteroidota
GTC
Asp
>WENV170639177
JFJP01001287
273589
Bacteroidota
CAT
Met
>WENV170639187
JFJP01001331
273589
Bacteroidota
CAT
Met
>WENV170639178
JFJP01001302
460716
Bacteroidota
GAA
Phe
>WENV170641977
JFJP01038348
466831
Bacteroidota
GCC
Gly
>WENV170642445
JFJP01041228
466831
Bacteroidota
GCC
Gly
>WENV170641791
JFJP01037605
456860
Bacteroidota
TCC
Gly
>WENV170642768
JFJP01044500
456864
Bacteroidota
CAT
Met
>WENV170639200
JFJP01001474
281769
Bacteroidota
TCG
Arg
>WENV170641799
JFJP01037627
281769
Bacteroidota
TCG
Arg
>WENV170643195
JFJP01051385
276430
Bacteroidota
CAT
Met
>WENV170643393
JFJP01055165
275630
Bacteroidota
GGC
Ala
>WENV170639186
JFJP01001328
456222
Bacteroidota
CAT
Met
>WENV170642976
JFJP01047551
456222
Bacteroidota
CAT
Met
>WENV170639181
JFJP01001316
180640
Bacteroidota
GTA
Tyr
>WENV170642873
JFJP01046515
180640
Bacteroidota
GTA
Tyr
>WENV170639166
JFJP01001236
460717
Bacteroidota
TTT
Lys
>WENV170639167
JFJP01001236
460717
Bacteroidota
TTT
Lys
>WENV170642677
JFJP01043343
88239
Bacteroidota
TGA
Ser
>WENV170639180
JFJP01001316
281970
Bacteroidota
TGT
Thr
>WENV170639184
JFJP01001319
281970
Bacteroidota
TGT
Thr
>WENV170641868
JFJP01037904
308058
Bacteroidota
GTC
Asp
>WENV170641869
JFJP01037904
308058
Bacteroidota
GTC
Asp
>WENV170641870
JFJP01037904
308058
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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