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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170723623
LSQX01275574
298766
Campylobacterota
GTC
Asp
>WENV170726616
LSQX01387703
451605
Campylobacterota
TAC
Val
>WENV170717936
LSQX01055167
289679
Campylobacterota
TCG
Arg
>WENV170721010
LSQX01175751
312550
Campylobacterota
CAT
Met
>WENV170723621
LSQX01275574
671184
Campylobacterota
TTC
Glu
>WENV170722720
LSQX01240695
289690
Campylobacterota
TCC
Gly
>WENV170726661
LSQX01389012
289690
Campylobacterota
TCC
Gly
>WENV170722718
LSQX01240695
289693
Campylobacterota
TGT
Thr
>WENV170722068
LSQX01215152
52806
Campylobacterota
GCT
Ser
>WENV170722719
LSQX01240695
185724
Campylobacterota
GTA
Tyr
>WENV170716853
LSQX01014191
483670
Campylobacterota
TGT
Thr
>WENV170723622
LSQX01275574
482077
Campylobacterota
TAC
Val
>WENV170721009
LSQX01175751
686327
Campylobacterota
TTG
Gln
>WENV170723380
LSQX01266485
654964
Campylobacterota
GGT
Thr
>WENV170716619
LSQX01005666
270782
Campylobacterota
CAT
Met
>WENV170726659
LSQX01389012
298531
Campylobacterota
TCT
Arg
>WENV170721891
LSQX01207853
241575
Campylobacterota
TGG
Pro
>WENV170722717
LSQX01240695
482078
Campylobacterota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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