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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
160 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170820744
MDSY01009775
657483
Bacteroidota
TTG
Gln
>WENV170821064
MDSY01015646
657483
Bacteroidota
TTG
Gln
>WENV170823801
MDSY01064023
657483
Bacteroidota
TTG
Gln
>WENV170823831
MDSY01064903
657483
Bacteroidota
TTG
Gln
>WENV170824478
MDSY01076832
657483
Bacteroidota
TTG
Gln
>WENV170824730
MDSY01081172
657483
Bacteroidota
TTG
Gln
>WENV170825232
MDSY01089233
657483
Bacteroidota
TTG
Gln
>WENV170824316
MDSY01073767
275492
Bacteroidota
GGG
Pro
>WENV170826827
MDSY01117496
278884
Bacteroidota
GGC
Ala
>WENV170827644
MDSY01133611
241291
Bacteroidota
GGG
Pro
>WENV170820772
MDSY01010535
456730
Bacteroidota
TTT
Lys
>WENV170821297
MDSY01019725
456730
Bacteroidota
TTT
Lys
>WENV170823306
MDSY01054929
456730
Bacteroidota
TTT
Lys
>WENV170824139
MDSY01070230
456730
Bacteroidota
TTT
Lys
>WENV170824191
MDSY01071392
456730
Bacteroidota
TTT
Lys
>WENV170826014
MDSY01104134
456730
Bacteroidota
TTT
Lys
>WENV170827910
MDSY01138790
456730
Bacteroidota
TTT
Lys
>WENV170827957
MDSY01139538
456730
Bacteroidota
TTT
Lys
>WENV170828050
MDSY01141749
456730
Bacteroidota
TTT
Lys
>WENV170821674
MDSY01025981
273835
Bacteroidota
GTT
Asn
>WENV170826437
MDSY01110766
273835
Bacteroidota
GTT
Asn
>WENV170827122
MDSY01123418
273835
Bacteroidota
GTT
Asn
>WENV170828430
MDSY01149897
273835
Bacteroidota
GTT
Asn
>WENV170821273
MDSY01019337
653934
Bacteroidota
TTC
Glu
>WENV170821274
MDSY01019337
653934
Bacteroidota
TTC
Glu
>WENV170827864
MDSY01137995
653934
Bacteroidota
TTC
Glu
>WENV170820445
MDSY01004883
452486
Bacteroidota
TCC
Gly
>WENV170821617
MDSY01024999
452486
Bacteroidota
TCC
Gly
>WENV170822954
MDSY01049190
452486
Bacteroidota
TCC
Gly
>WENV170824258
MDSY01072647
452486
Bacteroidota
TCC
Gly
>WENV170825773
MDSY01099611
452486
Bacteroidota
TCC
Gly
>WENV170823854
MDSY01065171
459846
Bacteroidota
TCC
Gly
>WENV170820212
MDSY01000563
455860
Bacteroidota
TCC
Gly
>WENV170823771
MDSY01063394
456728
Bacteroidota
CAT
Met
>WENV170822301
MDSY01037800
271717
Bacteroidota
GTC
Asp
>WENV170823201
MDSY01053534
271717
Bacteroidota
GTC
Asp
>WENV170823399
MDSY01056973
271717
Bacteroidota
GTC
Asp
>WENV170824041
MDSY01069055
271717
Bacteroidota
GTC
Asp
>WENV170827163
MDSY01124110
271717
Bacteroidota
GTC
Asp
>WENV170827307
MDSY01126600
271717
Bacteroidota
GTC
Asp
>WENV170828726
MDSY01155283
240975
Bacteroidota
TAC
Val
>WENV170820973
MDSY01014328
456729
Bacteroidota
GAA
Phe
>WENV170821345
MDSY01020600
456729
Bacteroidota
GAA
Phe
>WENV170824711
MDSY01080731
456729
Bacteroidota
GAA
Phe
>WENV170825531
MDSY01094575
456729
Bacteroidota
GAA
Phe
>WENV170826544
MDSY01112522
456729
Bacteroidota
GAA
Phe
>WENV170825179
MDSY01088484
653874
Bacteroidota
TTC
Glu
>WENV170821559
MDSY01024062
456414
Bacteroidota
GAA
Phe
>WENV170824636
MDSY01079359
456414
Bacteroidota
GAA
Phe
>WENV170827013
MDSY01121207
456414
Bacteroidota
GAA
Phe
>WENV170827295
MDSY01126168
456414
Bacteroidota
GAA
Phe
>WENV170828296
MDSY01146766
456414
Bacteroidota
GAA
Phe
>WENV170828849
MDSY01156829
456414
Bacteroidota
GAA
Phe
>WENV170828863
MDSY01156986
456414
Bacteroidota
GAA
Phe
>WENV170827793
MDSY01136291
20215
Bacteroidota
GCT
Ser
>WENV170821099
MDSY01016410
657523
Bacteroidota
TTC
Glu
>WENV170821504
MDSY01023150
657523
Bacteroidota
TTC
Glu
>WENV170823639
MDSY01061158
657523
Bacteroidota
TTC
Glu
>WENV170821453
MDSY01022453
241614
Bacteroidota
GAC
Val
>WENV170825009
MDSY01085834
241614
Bacteroidota
GAC
Val
>WENV170825023
MDSY01086174
241614
Bacteroidota
GAC
Val
>WENV170825178
MDSY01088484
241614
Bacteroidota
GAC
Val
>WENV170825855
MDSY01100945
241614
Bacteroidota
GAC
Val
>WENV170827068
MDSY01122366
241614
Bacteroidota
GAC
Val
>WENV170827126
MDSY01123457
241614
Bacteroidota
GAC
Val
>WENV170821696
MDSY01026278
241622
Bacteroidota
TAC
Val
>WENV170823877
MDSY01065905
113750
Bacteroidota
GCT
Ser
>WENV170825034
MDSY01086629
113750
Bacteroidota
GCT
Ser
>WENV170826367
MDSY01109354
452741
Bacteroidota
TCC
Gly
>WENV170828199
MDSY01144842
452741
Bacteroidota
TCC
Gly
>WENV170822407
MDSY01039565
452487
Bacteroidota
CCA
Trp
>WENV170822993
MDSY01049747
452487
Bacteroidota
CCA
Trp
>WENV170823620
MDSY01060930
452487
Bacteroidota
CCA
Trp
>WENV170828360
MDSY01148360
452487
Bacteroidota
CCA
Trp
>WENV170828685
MDSY01154448
452487
Bacteroidota
CCA
Trp
>WENV170820754
MDSY01009946
457615
Bacteroidota
TTT
Lys
>WENV170826004
MDSY01103887
457615
Bacteroidota
TTT
Lys
>WENV170826713
MDSY01115512
658037
Bacteroidota
GCC
Gly
>WENV170822914
MDSY01048667
272122
Bacteroidota
GTC
Asp
>WENV170823531
MDSY01059388
272122
Bacteroidota
GTC
Asp
>WENV170824009
MDSY01068478
272122
Bacteroidota
GTC
Asp
>WENV170824950
MDSY01084978
272122
Bacteroidota
GTC
Asp
>WENV170827167
MDSY01124158
272122
Bacteroidota
GTC
Asp
>WENV170828329
MDSY01147506
272122
Bacteroidota
GTC
Asp
>WENV170821279
MDSY01019415
272122
Bacteroidota
GTC
Asp
>WENV170824458
MDSY01076390
657856
Bacteroidota
TTC
Glu
>WENV170824459
MDSY01076390
657856
Bacteroidota
TTC
Glu
>WENV170827674
MDSY01134017
655825
Bacteroidota
TTC
Glu
>WENV170820366
MDSY01003453
655825
Bacteroidota
TTC
Glu
>WENV170822392
MDSY01039458
655825
Bacteroidota
TTC
Glu
>WENV170822875
MDSY01048064
655825
Bacteroidota
TTC
Glu
>WENV170823524
MDSY01059259
655825
Bacteroidota
TTC
Glu
>WENV170826138
MDSY01106149
655825
Bacteroidota
TTC
Glu
>WENV170827283
MDSY01125837
655825
Bacteroidota
TTC
Glu
>WENV170827482
MDSY01129878
655825
Bacteroidota
TTC
Glu
>WENV170822978
MDSY01049578
30679
Bacteroidota
GGA
Ser
>WENV170824175
MDSY01071079
459901
Bacteroidota
CCA
Trp
>WENV170820543
MDSY01006487
781319
Bacteroidota
GCA
Cys
>WENV170826935
MDSY01119617
452277
Bacteroidota
CAT
Met
>WENV170822261
MDSY01037009
275494
Bacteroidota
CAT
Met
>WENV170823572
MDSY01060157
275494
Bacteroidota
CAT
Met
>WENV170825496
MDSY01093736
275494
Bacteroidota
CAT
Met
>WENV170828200
MDSY01144842
653881
Bacteroidota
GGT
Thr
>WENV170826529
MDSY01112218
180784
Bacteroidota
TAG
Leu
>WENV170828332
MDSY01147631
180784
Bacteroidota
TAG
Leu
>WENV170828631
MDSY01153497
180784
Bacteroidota
TAG
Leu
>WENV170823083
MDSY01051388
241654
Bacteroidota
TAC
Val
>WENV170823411
MDSY01057175
241407
Bacteroidota
TGG
Pro
>WENV170823826
MDSY01064690
241407
Bacteroidota
TGG
Pro
>WENV170824717
MDSY01080905
241407
Bacteroidota
TGG
Pro
>WENV170828062
MDSY01142032
241407
Bacteroidota
TGG
Pro
>WENV170826237
MDSY01107717
241721
Bacteroidota
TAC
Val
>WENV170822741
MDSY01045594
452740
Bacteroidota
GAA
Phe
>WENV170824221
MDSY01072123
454305
Bacteroidota
TTT
Lys
>WENV170826052
MDSY01104751
278767
Bacteroidota
GTG
His
>WENV170825294
MDSY01090433
657921
Bacteroidota
TTC
Glu
>WENV170828423
MDSY01149704
657921
Bacteroidota
TTC
Glu
>WENV170826537
MDSY01112360
460269
Bacteroidota
CAT
Met
>WENV170822794
MDSY01046459
453189
Bacteroidota
TTG
Gln
>WENV170825467
MDSY01093464
453189
Bacteroidota
TTG
Gln
>WENV170826923
MDSY01119363
453189
Bacteroidota
TTG
Gln
>WENV170827964
MDSY01139715
453189
Bacteroidota
TTG
Gln
>WENV170822084
MDSY01033734
241634
Bacteroidota
TGG
Pro
>WENV170823301
MDSY01054859
241634
Bacteroidota
TGG
Pro
>WENV170824729
MDSY01081082
241634
Bacteroidota
TGG
Pro
>WENV170825393
MDSY01091941
241634
Bacteroidota
TGG
Pro
>WENV170828433
MDSY01149982
241634
Bacteroidota
TGG
Pro
>WENV170820284
MDSY01001753
181258
Bacteroidota
GTA
Tyr
>WENV170824909
MDSY01084050
278610
Bacteroidota
GTC
Asp
>WENV170827253
MDSY01125398
278725
Bacteroidota
GTT
Asn
>WENV170825705
MDSY01098424
278725
Bacteroidota
GTT
Asn
>WENV170826727
MDSY01115815
278725
Bacteroidota
GTT
Asn
>WENV170821547
MDSY01023754
655582
Bacteroidota
GCC
Gly
>WENV170821725
MDSY01027013
655582
Bacteroidota
GCC
Gly
>WENV170824707
MDSY01080694
655582
Bacteroidota
GCC
Gly
>WENV170826274
MDSY01108252
655582
Bacteroidota
GCC
Gly
>WENV170823153
MDSY01052575
112383
Bacteroidota
TAA
Leu
>WENV170826359
MDSY01109249
275493
Bacteroidota
GTG
His
>WENV170822117
MDSY01034310
228657
Bacteroidota
CAA
Leu
>WENV170820969
MDSY01014275
277953
Bacteroidota
GTC
Asp
>WENV170822080
MDSY01033606
277953
Bacteroidota
GTC
Asp
>WENV170823967
MDSY01067570
277953
Bacteroidota
GTC
Asp
>WENV170824600
MDSY01078751
277953
Bacteroidota
GTC
Asp
>WENV170825537
MDSY01094623
277953
Bacteroidota
GTC
Asp
>WENV170825916
MDSY01102370
277953
Bacteroidota
GTC
Asp
>WENV170826240
MDSY01107776
277953
Bacteroidota
GTC
Asp
>WENV170826631
MDSY01114062
277953
Bacteroidota
GTC
Asp
>WENV170826867
MDSY01117983
277953
Bacteroidota
GTC
Asp
>WENV170824257
MDSY01072647
180640
Bacteroidota
GTA
Tyr
>WENV170828002
MDSY01140701
180640
Bacteroidota
GTA
Tyr
>WENV170828198
MDSY01144842
180640
Bacteroidota
GTA
Tyr
>WENV170825919
MDSY01102384
86958
Bacteroidota
TGA
Ser
>WENV170827312
MDSY01126666
86958
Bacteroidota
TGA
Ser
>WENV170828268
MDSY01146370
86958
Bacteroidota
TGA
Ser
>WENV170820448
MDSY01004945
240659
Bacteroidota
TGG
Pro
>WENV170821945
MDSY01031108
30383
Bacteroidota
GGA
Ser
>WENV170821876
MDSY01029935
240683
Bacteroidota
TGG
Pro
>WENV170822276
MDSY01037407
240683
Bacteroidota
TGG
Pro
>WENV170824094
MDSY01069539
240683
Bacteroidota
TGG
Pro
>WENV170821567
MDSY01024223
275165
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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