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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180101017
OAOU01000001
781219
Gammaproteobacteria
GCA
Cys
>WENV180101018
OAOU01000001
112989
Gammaproteobacteria
TAA
Leu
>WENV180101019
OAOU01000001
180112
Gammaproteobacteria
TAG
Leu
>WENV180101020
OAOU01000001
452599
Gammaproteobacteria
TAC
Val
>WENV180101021
OAOU01000001
271613
Gammaproteobacteria
GTC
Asp
>WENV180101024
OAOU01000002
653944
Gammaproteobacteria
GCC
Gly
>WENV180101025
OAOU01000003
271619
Gammaproteobacteria
CAT
Met
>WENV180101027
OAOU01000005
653944
Gammaproteobacteria
GCC
Gly
>WENV180101031
OAOU01000012
452605
Gammaproteobacteria
GGC
Ala
>WENV180101032
OAOU01000012
452604
Gammaproteobacteria
TTC
Glu
>WENV180101033
OAOU01000013
271611
Gammaproteobacteria
TGG
Pro
>WENV180101035
OAOU01000013
452598
Gammaproteobacteria
GTG
His
>WENV180101037
OAOU01000019
452600
Gammaproteobacteria
GTT
Asn
>WENV180101038
OAOU01000019
452604
Gammaproteobacteria
TTC
Glu
>WENV180101039
OAOU01000019
32822
Gammaproteobacteria
TGA
Ser
>WENV180101041
OAOU01000023
271616
Gammaproteobacteria
CAT
Met
>WENV180101042
OAOU01000032
271617
Gammaproteobacteria
GGG
Pro
>WENV180101043
OAOU01000032
271618
Gammaproteobacteria
CCG
Arg
>WENV180101044
OAOU01000036
452599
Gammaproteobacteria
TAC
Val
>WENV180101045
OAOU01000036
271613
Gammaproteobacteria
GTC
Asp
>WENV180101047
OAOU01000051
653944
Gammaproteobacteria
GCC
Gly
>WENV180101048
OAOU01000052
452597
Gammaproteobacteria
TTG
Gln
>WENV180101049
OAOU01000052
452597
Gammaproteobacteria
TTG
Gln
>WENV180101050
OAOU01000053
271617
Gammaproteobacteria
GGG
Pro
>WENV180101052
OAOU01000071
271619
Gammaproteobacteria
CAT
Met
>WENV180101054
OAOU01000078
180112
Gammaproteobacteria
TAG
Leu
>WENV180101062
OAOU01000095
452599
Gammaproteobacteria
TAC
Val
>WENV180101063
OAOU01000095
271613
Gammaproteobacteria
GTC
Asp
>WENV180101064
OAOU01000096
653944
Gammaproteobacteria
GCC
Gly
>WENV180101069
OAOU01000131
271617
Gammaproteobacteria
GGG
Pro
>WENV180101070
OAOU01000142
271616
Gammaproteobacteria
CAT
Met
>WENV180101071
OAOU01000151
452599
Gammaproteobacteria
TAC
Val
>WENV180101072
OAOU01000151
271613
Gammaproteobacteria
GTC
Asp
>WENV180101078
OAOU01000218
452604
Gammaproteobacteria
TTC
Glu
>WENV180101080
OAOU01000263
180112
Gammaproteobacteria
TAG
Leu
>WENV180101086
OAOU01000317
452601
Gammaproteobacteria
TTT
Lys
>WENV180101091
OAOU01000416
452604
Gammaproteobacteria
TTC
Glu
>WENV180101092
OAOU01000430
271616
Gammaproteobacteria
CAT
Met
>WENV180101094
OAOU01000451
452600
Gammaproteobacteria
GTT
Asn
>WENV180101107
OAOU01000602
452597
Gammaproteobacteria
TTG
Gln
>WENV180101151
OAOU01001811
452600
Gammaproteobacteria
GTT
Asn
>WENV180101161
OAOU01002614
32822
Gammaproteobacteria
TGA
Ser
>WENV180101194
OAOU01005197
452601
Gammaproteobacteria
TTT
Lys
>WENV180101221
OAOU01007676
452603
Gammaproteobacteria
CCA
Trp
>WENV180101245
OAOU01011551
452602
Gammaproteobacteria
TGC
Ala
>WENV180101279
OAOU01017761
452607
Gammaproteobacteria
TGT
Thr
>WENV180101280
OAOU01017761
218041
Gammaproteobacteria
GTA
Tyr
>WENV180101281
OAOU01017761
779641
Gammaproteobacteria
TCC
Gly
>WENV180101282
OAOU01017761
655603
Gammaproteobacteria
GGT
Thr
>WENV180101410
OAOU01058818
46525
Gammaproteobacteria
GCT
Ser
>WENV180101411
OAOU01058818
274723
Gammaproteobacteria
ACG
Arg
>WENV180101419
OAOU01059292
291681
Gammaproteobacteria
GAT
Ile
>WENV180101428
OAOU01060847
452601
Gammaproteobacteria
TTT
Lys
>WENV180101447
OAOU01063099
452597
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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