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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180125838
OASZ01000146
270507
Bacillota
GTC
Asp
>WENV180125988
OASZ01000301
270507
Bacillota
GTC
Asp
>WENV180126458
OASZ01007866
273293
Bacillota
ACG
Arg
>WENV180126439
OASZ01007092
653489
Bacillota
GTT
Asn
>WENV180125999
OASZ01000305
275613
Bacillota
GTG
His
>WENV180125683
OASZ01000021
451468
Bacillota
TAC
Val
>WENV180125685
OASZ01000021
451468
Bacillota
TAC
Val
>WENV180126505
OASZ01012391
270726
Bacillota
GTC
Asp
>WENV180125628
OASZ01000003
455828
Bacillota
TAC
Val
>WENV180125630
OASZ01000003
455828
Bacillota
TAC
Val
>WENV180125654
OASZ01000007
455828
Bacillota
TAC
Val
>WENV180125928
OASZ01000237
455828
Bacillota
TAC
Val
>WENV180125965
OASZ01000274
455828
Bacillota
TAC
Val
>WENV180126130
OASZ01000630
455828
Bacillota
TAC
Val
>WENV180126334
OASZ01002882
455828
Bacillota
TAC
Val
>WENV180126531
OASZ01015361
19864
Bacillota
GGA
Ser
>WENV180125883
OASZ01000193
270436
Bacillota
GTG
His
>WENV180126407
OASZ01004638
467910
Bacillota
TGC
Ala
>WENV180126392
OASZ01004272
451587
Bacillota
TGC
Ala
>WENV180126479
OASZ01010089
270723
Bacillota
CAT
Met
>WENV180126022
OASZ01000338
656947
Bacillota
TTC
Glu
>WENV180126098
OASZ01000531
281879
Bacillota
GTC
Asp
>WENV180126579
OASZ01023413
271477
Bacillota
GTC
Asp
>WENV180126622
OASZ01050628
780082
Bacillota
TCC
Gly
>WENV180126506
OASZ01012391
653488
Bacillota
TGT
Thr
>WENV180126460
OASZ01007989
460662
Bacillota
GCC
Gly
>WENV180125919
OASZ01000228
659884
Bacillota
CTG
Gln
>WENV180125920
OASZ01000228
659884
Bacillota
CTG
Gln
>WENV180125921
OASZ01000228
659884
Bacillota
CTG
Gln
>WENV180126418
OASZ01005170
659884
Bacillota
CTG
Gln
>WENV180126294
OASZ01002036
780499
Bacillota
GCA
Cys
>WENV180126043
OASZ01000367
780499
Bacillota
GCA
Cys
>WENV180126504
OASZ01012391
451672
Bacillota
TAC
Val
>WENV180126577
OASZ01023413
654050
Bacillota
TTC
Glu
>WENV180126518
OASZ01012685
281884
Bacillota
TCT
Arg
>WENV180126224
OASZ01001288
273950
Bacillota
ACG
Arg
>WENV180126406
OASZ01004638
279224
Bacillota
GAT
Ile
>WENV180125916
OASZ01000226
112978
Bacillota
AAG
Leu
>WENV180125922
OASZ01000228
112978
Bacillota
AAG
Leu
>WENV180126105
OASZ01000534
112978
Bacillota
AAG
Leu
>WENV180126255
OASZ01001531
112978
Bacillota
AAG
Leu
>WENV180126258
OASZ01001567
112978
Bacillota
AAG
Leu
>WENV180126536
OASZ01016241
112978
Bacillota
AAG
Leu
>WENV180126452
OASZ01007866
273292
Bacillota
TTC
Glu
>WENV180125865
OASZ01000183
465201
Bacillota
TAC
Val
>WENV180126140
OASZ01000648
465201
Bacillota
TAC
Val
>WENV180126630
OASZ01051302
458368
Bacillota
TGT
Thr
>WENV180126548
OASZ01017525
779608
Bacillota
TCC
Gly
>WENV180125772
OASZ01000073
275959
Bacillota
CAT
Met
>WENV180126243
OASZ01001412
455831
Bacillota
GTT
Asn
>WENV180126313
OASZ01002473
455831
Bacillota
GTT
Asn
>WENV180126429
OASZ01006419
455831
Bacillota
GTT
Asn
>WENV180126564
OASZ01022452
455831
Bacillota
GTT
Asn
>WENV180126600
OASZ01032303
455831
Bacillota
GTT
Asn
>WENV180126443
OASZ01007305
451398
Bacillota
TGC
Ala
>WENV180126546
OASZ01017044
451398
Bacillota
TGC
Ala
>WENV180126551
OASZ01017622
451398
Bacillota
TGC
Ala
>WENV180125755
OASZ01000058
653349
Bacillota
GCC
Gly
>WENV180126275
OASZ01001929
653349
Bacillota
GCC
Gly
>WENV180126550
OASZ01017525
452444
Bacillota
GTG
His
>WENV180126029
OASZ01000348
779389
Bacillota
TCC
Gly
>WENV180126049
OASZ01000381
779389
Bacillota
TCC
Gly
>WENV180126262
OASZ01001728
779389
Bacillota
TCC
Gly
>WENV180126264
OASZ01001728
779389
Bacillota
TCC
Gly
>WENV180126636
OASZ01051378
779389
Bacillota
TCC
Gly
>WENV180125989
OASZ01000301
72902
Bacillota
TAA
Leu
>WENV180126176
OASZ01000845
72902
Bacillota
TAA
Leu
>WENV180126507
OASZ01012391
179950
Bacillota
GTA
Tyr
>WENV180126474
OASZ01010089
270621
Bacillota
TCT
Arg
>WENV180126030
OASZ01000348
274799
Bacillota
TCT
Arg
>WENV180126065
OASZ01000428
451387
Bacillota
TTT
Lys
>WENV180126235
OASZ01001337
451387
Bacillota
TTT
Lys
>WENV180126459
OASZ01007866
273236
Bacillota
TGG
Pro
>WENV180126509
OASZ01012391
653441
Bacillota
GCC
Gly
>WENV180126457
OASZ01007866
72826
Bacillota
TAA
Leu
>WENV180126603
OASZ01035329
654861
Bacillota
CCG
Arg
>WENV180126193
OASZ01000943
653398
Bacillota
CTC
Glu
>WENV180126344
OASZ01003152
653398
Bacillota
CTC
Glu
>WENV180125703
OASZ01000027
284871
Bacillota
GAT
Ile
>WENV180125705
OASZ01000027
284871
Bacillota
GAT
Ile
>WENV180126508
OASZ01012391
218014
Bacillota
TAG
Leu
>WENV180125806
OASZ01000101
284667
Bacillota
CAT
Met
>WENV180125808
OASZ01000101
284667
Bacillota
CAT
Met
>WENV180125976
OASZ01000294
282769
Bacillota
CAT
Met
>WENV180125978
OASZ01000294
282769
Bacillota
CAT
Met
>WENV180126456
OASZ01007866
454356
Bacillota
TTT
Lys
>WENV180125764
OASZ01000061
274813
Bacillota
ACG
Arg
>WENV180126249
OASZ01001430
274813
Bacillota
ACG
Arg
>WENV180126010
OASZ01000309
270518
Bacillota
CAT
Met
>WENV180126132
OASZ01000630
270518
Bacillota
CAT
Met
>WENV180126549
OASZ01017525
289179
Bacillota
TCT
Arg
>WENV180126126
OASZ01000623
73357
Bacillota
TGA
Ser
>WENV180126613
OASZ01045077
467075
Bacillota
TGC
Ala
>WENV180125815
OASZ01000109
282417
Bacillota
GGG
Pro
>WENV180125828
OASZ01000128
282417
Bacillota
GGG
Pro
>WENV180126346
OASZ01003191
282417
Bacillota
GGG
Pro
>WENV180126244
OASZ01001412
653354
Bacillota
TTC
Glu
>WENV180126565
OASZ01022452
653354
Bacillota
TTC
Glu
>WENV180126364
OASZ01003844
451375
Bacillota
GGC
Ala
>WENV180126424
OASZ01005771
30533
Bacillota
GCT
Ser
>WENV180125762
OASZ01000061
782407
Bacillota
TCC
Gly
>WENV180125997
OASZ01000305
782407
Bacillota
TCC
Gly
>WENV180126514
OASZ01012685
458370
Bacillota
TTT
Lys
>WENV180126621
OASZ01050555
458370
Bacillota
TTT
Lys
>WENV180126610
OASZ01039082
30295
Bacillota
GCT
Ser
>WENV180125884
OASZ01000193
656948
Bacillota
TTG
Gln
>WENV180126172
OASZ01000822
653373
Bacillota
TTC
Glu
>WENV180126300
OASZ01002076
457194
Bacillota
TAC
Val
>WENV180126447
OASZ01007442
457194
Bacillota
TAC
Val
>WENV180126058
OASZ01000406
780500
Bacillota
CCA
Trp
>WENV180126145
OASZ01000664
780500
Bacillota
CCA
Trp
>WENV180126267
OASZ01001728
780500
Bacillota
CCA
Trp
>WENV180126269
OASZ01001836
780500
Bacillota
CCA
Trp
>WENV180126524
OASZ01014301
780500
Bacillota
CCA
Trp
>WENV180126511
OASZ01012484
658259
Bacillota
CTC
Glu
>WENV180126437
OASZ01007058
285826
Bacillota
CAT
Met
>WENV180125973
OASZ01000292
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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