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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1014905
SRR023845.375078
273483
Betaproteobacteria
ACG
Arg
>SRA1014715
SRR023845.277468
780146
Betaproteobacteria
CCC
Gly
>SRA1014225
SRR023845.45359
180403
Betaproteobacteria
GAG
Leu
>SRA1014380
SRR023845.114661
487621
Betaproteobacteria
GCC
Gly
>SRA1014327
SRR023845.89792
525560
Betaproteobacteria
GCC
Gly
>SRA1014821
SRR023845.327274
273481
Betaproteobacteria
GGG
Pro
>SRA1014712
SRR023845.275043
452595
Betaproteobacteria
GTT
Asn
>SRA1014128
SRR023845.10586
456523
Betaproteobacteria
TTC
Glu
>SRA1015232
SRR023845.510772
273484
Betaproteobacteria
TTG
Gln
>SRA1014425
SRR023845.134073
457359
Betaproteobacteria
TTT
Lys
>SRA1015029
SRR023845.426223
457359
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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