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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170008761
APHM01004664
129112
Rhodothermota
GAT
Ile
>WENV170008723
APHM01002777
349663
Rhodothermota
GGT
Thr
>WENV170008836
APHM01009297
253646
Rhodothermota
GAA
Phe
>WENV170008724
APHM01002777
349664
Rhodothermota
CAT
Met
>WENV170008858
APHM01010997
38316
Rhodothermota
GAG
Leu
>WENV170008857
APHM01010997
161519
Rhodothermota
TTT
Lys
>WENV170008792
APHM01006085
253649
Rhodothermota
CTG
Gln
>WENV170008923
APHM01015659
253643
Rhodothermota
CCT
Arg
>WENV170008773
APHM01005520
161515
Rhodothermota
GTG
His
>WENV170008789
APHM01005926
129113
Rhodothermota
GTC
Asp
>WENV170008746
APHM01004158
129110
Rhodothermota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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